(272 days)
The BIOFIRE SPOTFIRE Respiratory/Sore Throat (R/ST) Panel Mini is an automated multiplexed polymerase chain reaction (PCR) test intended for use with the BIOFIRE SPOTFIRE System for the simultaneous, qualitative detection and identification of multiple respiratory viral and bacterial nucleic acids in nasopharyngeal swab (NPS) or anterior nasal swab (ANS) specimens obtained from individuals with signs and symptoms of respiratory tract infection, including COVID-19; (Respiratory menu) or in throat swab (TS) specimens from individuals with signs and symptoms of pharyngitis; (Sore Throat menu).
The following analytes are identified and differentiated using the BIOFIRE SPOTFIRE R/ST Panel Mini:
Respiratory Menu
Viruses
- Coronavirus SARS-CoV-2
- Human rhinovirus
- Influenza A virus
- Influenza B virus
- Respiratory syncytial virus
Sore Throat Menu
Viruses
- Human rhinovirus
- Influenza A virus
- Influenza B virus
- Respiratory syncytial virus
Bacteria
- Streptococcus pyogenes (group A Strep)
Nucleic acids from the viral and bacterial organisms identified by this test are generally detectable in NPS/ANS/TS specimens during the acute phase of infection. The detection and identification of specific viral and bacterial nucleic acids from individuals exhibiting signs and symptoms of respiratory infection and/or pharyngitis is indicative of the presence of the identified microorganism and aids in diagnosis if used in conjunction with other clinical and epidemiological information, and laboratory findings. The results of this test should not be used as the sole basis for diagnosis, treatment, or other patient management decisions.
Negative results in the setting of a respiratory illness and/or pharyngitis may be due to infection with pathogens that are not detected by this test, or a respiratory tract infection that may not be detected by an NPS, ANS, or TS specimen. Positive results do not rule out co-infection with other organisms. The agent(s) detected by the BIOFIRE SPOTFIRE R/ST Panel Mini may not be the definite cause of disease.
Additional laboratory testing (e.g., bacterial and viral culture, immunofluorescence, and radiography) may be necessary when evaluating a patient with possible respiratory tract infection and/or pharyngitis.
The BIOFIRE SPOTFIRE R/ST Panel Mini (SPOTFIRE R/ST Panel Mini) simultaneously identifies 5 different respiratory viral pathogens in nasopharyngeal swabs (NPS) or anterior nasal swabs (ANS), or 5 different viral and bacterial pharyngitis pathogens in throat swabs (TS) from individuals with signs and symptoms of respiratory tract infections or pharyngitis, respectively, (see Table 1). The SPOTFIRE R/ST Panel Mini is compatible with the BIOFIRE® SPOTFIRE® System, a polymerase chain reaction (PCR)-based in vitro diagnostic system for infectious disease testing. The BIOFIRE SPOTFIRE System Software executes the SPOTFIRE R/ST Panel Mini test and interprets and reports the test results. The SPOTFIRE R/ST Panel Mini was designed to be used in CLIA-waived environments.
A test is initiated by loading Hydration Solution into the hydration solution injection port of the SPOTFIRE R/ST Panel Mini pouch and NPS, ANS, or TS specimen, mixed with the provided Sample Buffer, into the other sample injection port of the SPOTFIRE R/ST Panel Mini pouch and placing it in the SPOTFIRE System. The pouch contains all the reagents required for specimen testing and analysis in a freeze-dried format; the addition of Hydration Solution and Sample/Buffer Mix rehydrates the reagents. After the pouch is prepared, the SPOTFIRE System Software guides the user through the steps of placing the pouch into the instrument, scanning the pouch barcode, entering the sample identification, and initiating the run.
Nucleic acid extraction occurs within the SPOTFIRE R/ST Panel Mini pouch using mechanical and chemical lysis followed by purification using standard magnetic bead technology. After extracting and purifying nucleic acids from the unprocessed sample, the SPOTFIRE System performs a nested multiplex PCR that is executed in two stages. During the first stage, the SPOTFIRE System performs a single, large volume, highly multiplexed reverse transcription PCR (rt-PCR) reaction. The products from first stage PCR are then diluted and combined with a fresh, primer-free master mix and a fluorescent double-stranded DNA binding dye (LC Green® Plus, BioFire Diagnostics). The solution is then distributed to each well of the array. Array wells contain sets of primers designed specifically to amplify sequences internal to the PCR products generated during the first stage PCR reaction. The 2nd stage PCR, or nested PCR, is performed in singleplex fashion in each well of the array. At the conclusion of the 2nd stage PCR, the array is interrogated by melt curve analysis for the detection of signature amplicons denoting the presence of specific targets. A digital camera placed in front of the 2nd stage PCR captures fluorescent images of the PCR reactions and software interprets the data.
The SPOTFIRE System Software automatically interprets the results of each DNA melt curve analysis and combines the data with the results of the internal pouch controls to provide a test result for each organism on the SPOTFIRE R/ST Panel Mini.
The FDA 510(k) clearance letter details the acceptance criteria and study that proves the BIOFIRE SPOTFIRE Respiratory/Sore Throat Panel Mini meets these criteria, specifically for the addition of Anterior Nasal Swabs (ANS) as a sample type for the Respiratory Menu.
Here's the breakdown:
1. Table of Acceptance Criteria and Reported Device Performance
The acceptance criteria are implicitly defined by the reported performance metrics (Positive Percent Agreement - PPA and Negative Percent Agreement - NPA) in the clinical study. The device is deemed to meet these criteria if the lower bound of the 95% Confidence Interval (95% CI) for PPA and NPA is above acceptable thresholds (though specific numerical thresholds for "acceptable" are not explicitly stated as separate criteria, the observed high performance and clearance imply they were met).
| SPOTFIRE R/ST Panel Mini R Menu Analyte | Performance Metric | Reported Performance (Prospective Study) |
|---|---|---|
| Coronavirus SARS-CoV-2 | Positive Percent Agreement (PPA) | 96.2% (95% CI: 87.0-98.9%) |
| Negative Percent Agreement (NPA) | 99.6% (95% CI: 98.8-99.9%) | |
| Human rhinovirus | Positive Percent Agreement (PPA) | 95.7% (95% CI: 92.2-97.6%) |
| Negative Percent Agreement (NPA) | 95.0% (95% CI: 92.9-96.5%) | |
| Influenza A virus | Positive Percent Agreement (PPA) | 94.3% (95% CI: 84.6-98.1%) |
| Negative Percent Agreement (NPA) | 100% (95% CI: 99.5-100%) | |
| Influenza B virus | Positive Percent Agreement (PPA) | 100% (95% CI: 77.2-100%) |
| Negative Percent Agreement (NPA) | 100% (95% CI: 99.5-100%) | |
| Respiratory syncytial virus | Positive Percent Agreement (PPA) | 95.0% (95% CI: 83.5-98.6%) |
| Negative Percent Agreement (NPA) | 99.9% (95% CI: 99.3-100%) |
Archived Specimen Performance for Influenza B virus:
| Analyte | Performance Metric | Reported Performance (Archived Study) |
|---|---|---|
| Influenza B virus | Positive Percent Agreement (PPA) | 100% (95% CI: 90.1-100%) |
| Negative Percent Agreement (NPA) | 100% (95% CI: 98.2-100%) |
2. Sample Size Used for the Test Set and Data Provenance
- Test Set Sample Size:
- Clinical Performance (Prospective Study): 797 specimens (out of 820 initially enrolled, 23 excluded).
- Archived Specimen Testing: 241 specimens for Influenza B virus (35 positive, 206 negative).
- Data Provenance:
- Country of Origin: US (prospective multi-center study at five geographically distinct urgent care or emergency department study sites).
- Retrospective/Prospective: The study was primarily prospective, conducted from March 2024 to February 2025. This was supplemented with archived specimens for Influenza B due to low prevalence in the prospective study.
3. Number of Experts Used to Establish the Ground Truth for the Test Set and Qualifications of Those Experts
The document does not explicitly state the number or qualifications of experts used to establish the ground truth. It states that the performance was evaluated by comparing the test results with those from a "commercially available FDA-cleared multiplexed respiratory pathogen panel." This suggests that the ground truth was established by the results of this comparator method, which themselves would have been validated. No human expert interpretation of the comparator method is described.
4. Adjudication Method for the Test Set
The document mentions "Investigations of discrepant results are summarized in the footnotes." These footnotes indicate that for discrepant cases (e.g., false positives, false negatives), "additional molecular methods" were used to re-test the specimens. This implies a form of post-hoc adjudication using a more definitive or orthogonal molecular method to resolve discrepancies between the SPOTFIRE R/ST Panel Mini and the initial comparator.
5. If a Multi-Reader Multi-Case (MRMC) Comparative Effectiveness Study Was Done
No. This study is for a diagnostic PCR test, not an AI-assisted imaging or interpretation device. Therefore, an MRMC study and analysis of human reader improvement with AI assistance are not applicable.
6. If a Standalone (i.e., Algorithm Only Without Human-in-the-Loop Performance) Was Done
Yes. The study evaluates the performance of the BIOFIRE SPOTFIRE R/ST Panel Mini as a standalone diagnostic device. The results are automatically interpreted and reported by the system software, with no human interpretation step in the primary analysis flow. The study compares the device's output directly to the comparator method.
7. The Type of Ground Truth Used
The primary ground truth was established by a commercially available FDA-cleared multiplexed respiratory pathogen panel. For discrepant results, "additional molecular methods" were used for confirmatory testing, indicating a molecular gold standard approach.
8. The Sample Size for the Training Set
The document does not provide details about a training set size. This notice is a 510(k) clearance for a PCR-based in vitro diagnostic test, not a machine learning or AI algorithm in the traditional sense that requires distinct training and test sets in the same manner. The "test set" described is the clinical validation cohort for demonstrating performance. PCR assays are generally developed and optimized through laboratory analytical studies, not typically "trained" on large datasets in the way an AI model would be.
9. How the Ground Truth for the Training Set Was Established
As noted above, the concept of a "training set ground truth" is not applicable in this context, as the device is a PCR assay. The development and optimization of such assays involve different molecular and analytical validation processes to ensure specificity and sensitivity.
FDA 510(k) Clearance Letter - BIOFIRE SPOTFIRE Respiratory/Sore Throat Panel Mini
Page 1
August 14, 2025
BioFire Diagnostics, LLC
Karli Plenert
Sr. Director, Regulatory Affairs
515 Colorow Drive
Salt Lake City, Utah 84108
Re: K243544
Trade/Device Name: BIOFIRE SPOTFIRE Respiratory/Sore Throat Panel Mini
Regulation Number: 21 CFR 866.3981
Regulation Name: Device To Detect And Identify Nucleic Acid Targets In Respiratory Specimens From Microbial Agents That Cause The SARS-CoV-2 Respiratory Infection And Other Microbial Agents When In A Multi-Target Test
Regulatory Class: Class II
Product Code: QOF
Dated: November 14, 2024
Received: November 15, 2024
Dear Karli Plenert:
We have reviewed your section 510(k) premarket notification of intent to market the device referenced above and have determined the device is substantially equivalent (for the indications for use stated in the enclosure) to legally marketed predicate devices marketed in interstate commerce prior to May 28, 1976, the enactment date of the Medical Device Amendments, or to devices that have been reclassified in accordance with the provisions of the Federal Food, Drug, and Cosmetic Act (the Act) that do not require approval of a premarket approval application (PMA). You may, therefore, market the device, subject to the general controls provisions of the Act. Although this letter refers to your product as a device, please be aware that some cleared products may instead be combination products. The 510(k) Premarket Notification Database available at https://www.accessdata.fda.gov/scripts/cdrh/cfdocs/cfpmn/pmn.cfm identifies combination product submissions. The general controls provisions of the Act include requirements for annual registration, listing of devices, good manufacturing practice, labeling, and prohibitions against misbranding and adulteration. Please note: CDRH does not evaluate information related to contract liability warranties. We remind you, however, that device labeling must be truthful and not misleading.
If your device is classified (see above) into either class II (Special Controls) or class III (PMA), it may be subject to additional controls. Existing major regulations affecting your device can be found in the Code of Federal Regulations, Title 21, Parts 800 to 898. In addition, FDA may publish further announcements concerning your device in the Federal Register.
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K243544 - Karli Plenert Page 2
Additional information about changes that may require a new premarket notification are provided in the FDA guidance documents entitled "Deciding When to Submit a 510(k) for a Change to an Existing Device" (https://www.fda.gov/media/99812/download) and "Deciding When to Submit a 510(k) for a Software Change to an Existing Device" (https://www.fda.gov/media/99785/download).
Your device is also subject to, among other requirements, the Quality System (QS) regulation (21 CFR Part 820), which includes, but is not limited to, 21 CFR 820.30, Design controls; 21 CFR 820.90, Nonconforming product; and 21 CFR 820.100, Corrective and preventive action. Please note that regardless of whether a change requires premarket review, the QS regulation requires device manufacturers to review and approve changes to device design and production (21 CFR 820.30 and 21 CFR 820.70) and document changes and approvals in the device master record (21 CFR 820.181).
Please be advised that FDA's issuance of a substantial equivalence determination does not mean that FDA has made a determination that your device complies with other requirements of the Act or any Federal statutes and regulations administered by other Federal agencies. You must comply with all the Act's requirements, including, but not limited to: registration and listing (21 CFR Part 807); labeling (21 CFR Part 801 and Part 809); medical device reporting (reporting of medical device-related adverse events) (21 CFR Part 803) for devices or postmarketing safety reporting (21 CFR Part 4, Subpart B) for combination products (see https://www.fda.gov/combination-products/guidance-regulatory-information/postmarketing-safety-reporting-combination-products); good manufacturing practice requirements as set forth in the quality systems (QS) regulation (21 CFR Part 820) for devices or current good manufacturing practices (21 CFR Part 4, Subpart A) for combination products; and, if applicable, the electronic product radiation control provisions (Sections 531-542 of the Act); 21 CFR Parts 1000-1050.
All medical devices, including Class I and unclassified devices and combination product device constituent parts are required to be in compliance with the final Unique Device Identification System rule ("UDI Rule"). The UDI Rule requires, among other things, that a device bear a unique device identifier (UDI) on its label and package (21 CFR 801.20(a)) unless an exception or alternative applies (21 CFR 801.20(b)) and that the dates on the device label be formatted in accordance with 21 CFR 801.18. The UDI Rule (21 CFR 830.300(a) and 830.320(b)) also requires that certain information be submitted to the Global Unique Device Identification Database (GUDID) (21 CFR Part 830 Subpart E). For additional information on these requirements, please see the UDI System webpage at https://www.fda.gov/medical-devices/device-advice-comprehensive-regulatory-assistance/unique-device-identification-system-udi-system.
Also, please note the regulation entitled, "Misbranding by reference to premarket notification" (21 CFR 807.97). For questions regarding the reporting of adverse events under the MDR regulation (21 CFR Part 803), please go to https://www.fda.gov/medical-devices/medical-device-safety/medical-device-reporting-mdr-how-report-medical-device-problems.
For comprehensive regulatory information about medical devices and radiation-emitting products, including information about labeling regulations, please see Device Advice (https://www.fda.gov/medical-devices/device-advice-comprehensive-regulatory-assistance) and CDRH Learn (https://www.fda.gov/training-and-continuing-education/cdrh-learn). Additionally, you may contact the Division of Industry and Consumer Education (DICE) to ask a question about a specific regulatory topic. See the DICE website (https://www.fda.gov/medical-devices/device-advice-comprehensive-regulatory-
Page 3
K243544 - Karli Plenert Page 3
assistance/contact-us-division-industry-and-consumer-education-dice) for more information or contact DICE by email (DICE@fda.hhs.gov) or phone (1-800-638-2041 or 301-796-7100).
Sincerely,
ANNA M. MIELECH -S
Anna Mielech, PhD.
Deputy Branch Chief (Acting)
Viral Respiratory and HPV Branch
Division of Microbiology Devices
OHT7: Office of In Vitro Diagnostics
Office of Product Evaluation and Quality
Center for Devices and Radiological Health
Enclosure
Page 4
FORM FDA 3881 (8/23) Page 1 of 2
DEPARTMENT OF HEALTH AND HUMAN SERVICES
Food and Drug Administration
Indications for Use
Form Approved: OMB No. 0910-0120
Expiration Date: 07/31/2026
See PRA Statement below.
510(k) Number (if known): K243544
Device Name: BIOFIRE SPOTFIRE Respiratory/Sore Throat (R/ST) Panel Mini
Indications for Use (Describe)
The BIOFIRE SPOTFIRE Respiratory/Sore Throat (R/ST) Panel Mini is an automated multiplexed polymerase chain reaction (PCR) test intended for use with the BIOFIRE SPOTFIRE System for the simultaneous, qualitative detection and identification of multiple respiratory viral and bacterial nucleic acids in nasopharyngeal swab (NPS) or anterior nasal swab (ANS) specimens obtained from individuals with signs and symptoms of respiratory tract infection, including COVID-19; (Respiratory menu) or in throat swab (TS) specimens from individuals with signs and symptoms of pharyngitis; (Sore Throat menu).
The following analytes are identified and differentiated using the BIOFIRE SPOTFIRE R/ST Panel Mini:
Respiratory Menu
Viruses
- Coronavirus SARS-CoV-2
- Human rhinovirus
- Influenza A virus
- Influenza B virus
- Respiratory syncytial virus
Sore Throat Menu
Viruses
- Human rhinovirus
- Influenza A virus
- Influenza B virus
- Respiratory syncytial virus
Bacteria
- Streptococcus pyogenes (group A Strep)
Nucleic acids from the viral and bacterial organisms identified by this test are generally detectable in NPS/ANS/TS specimens during the acute phase of infection. The detection and identification of specific viral and bacterial nucleic acids from individuals exhibiting signs and symptoms of respiratory infection and/or pharyngitis is indicative of the presence of the identified microorganism and aids in diagnosis if used in conjunction with other clinical and epidemiological information, and laboratory findings. The results of this test should not be used as the sole basis for diagnosis, treatment, or other patient management decisions.
Negative results in the setting of a respiratory illness and/or pharyngitis may be due to infection with pathogens that are not detected by this test, or a respiratory tract infection that may not be detected by an NPS, ANS, or TS specimen. Positive results do not rule out co-infection with other organisms. The agent(s) detected by the BIOFIRE SPOTFIRE R/ST Panel Mini may not be the definite cause of disease.
Additional laboratory testing (e.g., bacterial and viral culture, immunofluorescence, and radiography) may be necessary when evaluating a patient with possible respiratory tract infection and/or pharyngitis.
Page 5
FORM FDA 3881 (8/23) Page 2 of 2
Type of Use (Select one or both, as applicable)
☒ Prescription Use (Part 21 CFR 801 Subpart D) ☐ Over-The-Counter Use (21 CFR 801 Subpart C)
CONTINUE ON A SEPARATE PAGE IF NEEDED.
This section applies only to requirements of the Paperwork Reduction Act of 1995.
DO NOT SEND YOUR COMPLETED FORM TO THE PRA STAFF EMAIL ADDRESS BELOW.
The burden time for this collection of information is estimated to average 79 hours per response, including the time to review instructions, search existing data sources, gather and maintain the data needed and complete and review the collection of information. Send comments regarding this burden estimate or any other aspect of this information collection, including suggestions for reducing this burden, to:
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Page 6
BIOFIRE® SPOTFIRE® Respiratory/Sore Throat (R/ST) Panel Mini
510(k) Summary
BioFire Diagnostics, LLC
Introduction:
The purpose of this 510(k) submission is to obtain clearance for the BIOFIRE® SPOTFIRE® Respiratory/Sore Throat (R/ST) Panel Mini (SPOTFIRE R/ST Panel Mini) with the addition of anterior nasal swabs (ANS) as a sample type for the Respiratory Menu. The SPOTFIRE R/ST Panel Mini is compatible with the BIOFIRE® SPOTFIRE® System, an automated, polymerase chain reaction (PCR)-based in vitro diagnostic system for infectious disease testing.
According to the requirements of 21 CFR 807.92, the information included with this submission provides sufficient detail to understand the basis for a determination of substantial equivalence.
Submitted by:
BioFire Diagnostics, LLC (bioMérieux)
515 Colorow Drive
Salt Lake City, UT 84108
Contact: Karli Plenert, MBA
Telephone: 385-414-4985
Email: Karli.Plenert@biomerieux.com
Date submitted: August 08, 2025
Device Name and Classification:
Trade name: BIOFIRE® SPOTFIRE® Respiratory/Sore Throat (R/ST) Panel Mini
Regulation Number for Device Classification: 21 CFR 866.3981
Classification Name: Multi-Target Respiratory Specimen Nucleic Acid Test Including SARS-CoV-2 And Other Microbial Agents
Product Code: QOF
Predicate Device:
K241194 – BIOFIRE® SPOTFIRE® Respiratory/Sore Throat (R/ST) Panel Mini
Page 7
Intended Use:
The BIOFIRE® SPOTFIRE® Respiratory/Sore Throat (R/ST) Panel Mini is an automated, multiplexed, polymerase chain reaction (PCR) test intended for use with the BIOFIRE® SPOTFIRE® System for the simultaneous, qualitative detection and identification of multiple respiratory viral and bacterial nucleic acids in nasopharyngeal swab (NPS) and anterior nasal swab (ANS) specimens obtained from individuals with signs and symptoms of respiratory tract infection, including COVID-19; (Respiratory menu) or in throat swab (TS) specimens from individuals with signs and symptoms of pharyngitis; (Sore Throat menu).
The following analytes are identified and differentiated using the BIOFIRE SPOTFIRE R/ST Panel Mini:
Table 1. SPOTFIRE R/ST Panel Mini Analytes
| Respiratory Menu | Sore Throat Menu |
|---|---|
| Viruses | Viruses |
| Coronavirus SARS-CoV-2 | Human rhinovirus |
| Human rhinovirus | Influenza A virus |
| Influenza A virus | Influenza B virus |
| Influenza B virus | Respiratory syncytial virus |
| Respiratory syncytial virus | Bacteria |
| Streptococcus pyogenes (group A Strep) |
Nucleic acids from the viral and bacterial organisms identified by this test are generally detectable in NPS/ANS/TS specimens during the acute phase of infection. The detection and identification of specific viral and bacterial nucleic acids from individuals exhibiting signs and symptoms of respiratory infection and/or pharyngitis is indicative of the presence of the identified microorganism and aids in diagnosis if used in conjunction with other clinical and epidemiological information, and laboratory findings. The results of this test should not be used as the sole basis for diagnosis, treatment, or other patient management decisions.
Negative results in the setting of a respiratory illness and/or pharyngitis may be due to infection with pathogens that are not detected by this test, or a respiratory tract infection that may not be detected by an NPS, ANS, or TS specimen. Positive results do not rule out co-infection with other organisms. The agent(s) detected by the BIOFIRE SPOTFIRE R/ST Panel Mini may not be the definite cause of disease.
Additional laboratory testing (e.g., bacterial and viral culture, immunofluorescence, and radiography) may be necessary when evaluating a patient with possible respiratory tract infection and/or pharyngitis.
Device Description:
The BIOFIRE SPOTFIRE R/ST Panel Mini (SPOTFIRE R/ST Panel Mini) simultaneously identifies 5 different respiratory viral pathogens in nasopharyngeal swabs (NPS) or anterior nasal swabs (ANS), or 5 different viral and bacterial pharyngitis pathogens in throat swabs (TS) from individuals with signs and symptoms of respiratory tract infections or pharyngitis, respectively, (see Table 1). The SPOTFIRE R/ST Panel Mini is compatible with the BIOFIRE® SPOTFIRE® System, a polymerase chain reaction (PCR)-based in vitro diagnostic system for infectious disease testing. The BIOFIRE SPOTFIRE System Software executes the SPOTFIRE R/ST Panel Mini test and interprets and reports the test results. The SPOTFIRE R/ST Panel Mini was designed to be used in CLIA-waived environments.
A test is initiated by loading Hydration Solution into the hydration solution injection port of the SPOTFIRE R/ST Panel Mini pouch and NPS, ANS, or TS specimen, mixed with the provided Sample Buffer, into the other sample injection port of the SPOTFIRE R/ST Panel Mini pouch and placing it in the SPOTFIRE System. The pouch contains all the reagents required for specimen testing and analysis in a freeze-dried format; the addition of Hydration Solution and Sample/Buffer Mix rehydrates the reagents. After the pouch is prepared, the SPOTFIRE System Software guides the user through the steps of placing the pouch into the instrument, scanning the pouch barcode, entering the sample identification, and initiating the run.
Page 8
Nucleic acid extraction occurs within the SPOTFIRE R/ST Panel Mini pouch using mechanical and chemical lysis followed by purification using standard magnetic bead technology. After extracting and purifying nucleic acids from the unprocessed sample, the SPOTFIRE System performs a nested multiplex PCR that is executed in two stages. During the first stage, the SPOTFIRE System performs a single, large volume, highly multiplexed reverse transcription PCR (rt-PCR) reaction. The products from first stage PCR are then diluted and combined with a fresh, primer-free master mix and a fluorescent double-stranded DNA binding dye (LC Green® Plus, BioFire Diagnostics). The solution is then distributed to each well of the array. Array wells contain sets of primers designed specifically to amplify sequences internal to the PCR products generated during the first stage PCR reaction. The 2nd stage PCR, or nested PCR, is performed in singleplex fashion in each well of the array. At the conclusion of the 2nd stage PCR, the array is interrogated by melt curve analysis for the detection of signature amplicons denoting the presence of specific targets. A digital camera placed in front of the 2nd stage PCR captures fluorescent images of the PCR reactions and software interprets the data.
The SPOTFIRE System Software automatically interprets the results of each DNA melt curve analysis and combines the data with the results of the internal pouch controls to provide a test result for each organism on the SPOTFIRE R/ST Panel Mini.
Substantial Equivalence:
The BIOFIRE SPOTFIRE R/ST Panel Mini with ANS sample type for use with the Respiratory menu is substantially equivalent to the BIOFIRE SPOTFIRE R/ST Panel Mini (K241194), which was cleared via the Special 510(k) pathway on May 30, 2024, and determined to be a Class II device under the classification code 21 CFR 866.3981.
A comparison of the BIOFIRE SPOTFIRE R/ST Panel Mini to the BIOFIRE SPOTFIRE R/ST Panel Mini with ANS sample type is provided in Table 1.
Table 1 Similarities and differences between the BIOFIRE SPOTFIRE R/ST Panel Mini and the BIOFIRE SPOTFIRE R/ST Panel Mini with ANS sample type
| Element | BIOFIRE SPOTFIRE R/ST Panel Mini (K241194) | BIOFIRE SPOTFIRE R/ST Panel Mini (this submission) |
|---|---|---|
| Intended Use | The BIOFIRE® SPOTFIRE® Respiratory/Sore Throat (R/ST) Panel Mini is a multiplexed polymerase chain reaction (PCR) test intended for use with the BIOFIRE® SPOTFIRE® System for the simultaneous, qualitative detection and identification of multiple respiratory viral and bacterial nucleic acids in nasopharyngeal swab (NPS) specimens obtained from individuals with signs and symptoms of respiratory tract infection, including COVID-19; (Respiratory menu) or in throat swab (TS) specimens from individuals with signs and symptoms of pharyngitis (Sore Throat menu). | The BIOFIRE® SPOTFIRE® Respiratory/Sore Throat (R/ST) Panel Mini is an automated, multiplexed, polymerase chain reaction (PCR) test intended for use with the BIOFIRE® SPOTFIRE® System for the simultaneous, qualitative detection and identification of multiple respiratory viral and bacterial nucleic acids in nasopharyngeal swab (NPS) and anterior nasal swab (ANS) specimens obtained from individuals with signs and symptoms of respiratory tract infection, including COVID-19 (Respiratory menu); or in throat swab (TS) specimens from individuals with signs and symptoms of pharyngitis (Sore Throat menu). |
| The following analytes are identified and differentiated using the SPOTFIRE R/ST Panel Mini: | The following analytes are identified and differentiated using the SPOTFIRE R/ST Panel Mini: | |
| Respiratory Menu | Respiratory Menu | |
| Viruses | Viruses | |
| Coronavirus SARS-CoV-2 | Coronavirus SARS-CoV-2 | |
| Human rhinovirus | Human rhinovirus | |
| Influenza A virus | Influenza A virus | |
| Influenza B virus | Influenza B virus | |
| Respiratory syncytial virus | Respiratory syncytial virus | |
| Sore Throat Menu | Sore Throat Menu | |
| Viruses | Viruses | |
| Human rhinovirus | Human rhinovirus | |
| Influenza A virus | Influenza A virus | |
| Influenza B virus | Influenza B virus | |
| Respiratory syncytial virus | Respiratory syncytial virus | |
| Bacteria | Bacteria | |
| Streptococcus pyogenes (group A Strep) | Streptococcus pyogenes (group A Strep) |
Page 9
| Element | BIOFIRE SPOTFIRE R/ST Panel Mini (K241194) | BIOFIRE SPOTFIRE R/ST Panel Mini (this submission) |
|---|---|---|
| Specimen Types | Nasopharyngeal swab in transport media or Throat swab in transport media | Nasopharyngeal swab in transport media, Anterior nasal swab in transport media, or Throat swab in transport media |
| Organisms detected | Viruses Coronavirus SARS-CoV-2 (Respiratory Menu only) Human rhinovirus Influenza A virus Influenza B virus Respiratory syncytial virus Bacteria Streptococcus pyogenes (group A Strep) (Sore Throat Menu only) | Same |
| Analytes | DNA/RNA | Same |
| Technological Principles | Highly multiplexed nested nucleic acid amplification test with melt analysis | Same |
| Instrumentation | BIOFIRE SPOTFIRE System | Same |
| Time to result | About 15 minutes | Same |
| Reagent Storage | Room Temperature | Same |
| Test Interpretation | Automated test interpretation and reporting. User cannot access raw data. | Same |
| Panel Software Functions | Defines panel-specific parameters, instrument protocols and report requirements. | Same |
| Analyzes processed image data (fluorescence and temperature data) and provides test results. | Same | |
| Analyzes processed image data (fluorescence and temperature data) and provides test results. | Same |
Summary of Performance Data:
The performance data for the BIOFIRE SPOTFIRE R/ST Panel Mini is summarized in the BIOFIRE SPOTFIRE Respiratory/Sore Throat Panel Mini Instructions for Use. A summary of the SPOTFIRE R/ST Panel Mini performance data for ANS sample type and additional analytical specificity and interference is provided below.
Clinical Performance
The clinical performance of the SPOTFIRE R/ST Panel Mini when testing ANS specimens was established during a prospective multi-center study that was further supplemented with archived specimens due to low prevalence of influenza B in prospective clinical study. Five geographically distinct urgent care or emergency department study sites located in the US and representative of the intended use setting participated in the prospective clinical study from March 2024 to February 2025. All SPOTFIRE R/ST Panel Mini testing was performed according to the manufacturer's instructions by operators with training and educational backgrounds representative of those in the CLIA-waived setting.
A total of 820 ANS specimens were initially enrolled in the prospective clinical study from consented volunteers from subjects of all ages; 23 of these were excluded from all analyses. Eleven (11) specimens were excluded because no valid SPOTFIRE R/ST Panel Mini test for the ANS specimen was obtained, eight were excluded because no valid comparator test was obtained, and four additional specimens were excluded due to those specimens having been determined to not meet the inclusion criteria after initial enrollment. The final data set consisted of 797 specimens. Additionally, six of the 797 specimens were excluded from the evaluation of influenza A virus due to initial 'Uncertain' results that were not appropriately retested by operators at study sites (N=4) or initial inconclusive comparator results that were unable to be retested due to insufficient volume (N=2).
Table 2 provides a summary of demographic information for the specimens included in the study.
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Table 2. Demographic Summary for the SPOTFIRE R/ST Panel Mini ANS Sample Type Addition Prospective Clinical Evaluation
| Category | Prospective |
|---|---|
| Sex | |
| Male | 358 (44.9%) |
| Female | 439 (55.1%) |
| Age | |
| ≤5 years | 240 (30.1%) |
| 6-18 years | 213 (26.7%) |
| 19-40 years | 178 (22.3%) |
| 41-60 years | 116 (14.6%) |
| 61+ years | 50 (6.3%) |
| Total | 797 |
For each analyte, the performance of the SPOTFIRE R/ST Panel Mini when testing ANS specimens was evaluated by comparing the test results with those from a commercially available FDA-cleared multiplexed respiratory pathogen panel. The performance for the ANS sample type addition prospective study is summarized in Table 3. Positive percent agreement (PPA) for each analyte was calculated as 100% × (TP / (TP + FN)). True positive (TP) indicates that both the SPOTFIRE R/ST Panel Mini and the comparator method had a positive result for the specific analyte, and false negative (FN) indicates that the SPOTFIRE R/ST Panel Mini was negative while the comparator result was positive. Negative percent agreement (NPA) was calculated as 100% × (TN / TN + FP)). True negative (TN) indicates that both the SPOTFIRE R/ST Panel Mini and the comparator method had negative results, and false positive (FP) indicates that the SPOTFIRE R/ST Panel Mini was positive while the comparator method was negative. The exact binomial two-sided 95% confidence interval (95%CI) was calculated. Investigations of discrepant results are summarized in the footnotes.
Table 3. SPOTFIRE R/ST Panel Mini ANS Sample Type Addition Prospective Clinical Performance Summary for ANS Specimens
| SPOTFIRE R/ST Panel Mini R Menu Analyte | Positive Percent Agreement | Negative Percent Agreement | ||
|---|---|---|---|---|
| TP/(TP + FN) | % 95%CI | TN/(TN + FP) | % 95%CI | |
| Coronavirus SARS-CoV-2ᵃ | 50/52 | 96.2 87.0-98.9% | 742/745 | 99.6 98.8-99.9% |
| Human rhinovirusᵇ | 222/232 | 95.7 92.2-97.6% | 537/565 | 95.0 92.9-96.5% |
| Influenza A virusᶜ | 50/53 | 94.3 84.6-98.1% | 738/738 | 100 99.5-100% |
| Influenza B virus | 13/13 | 100 77.2-100% | 784/784 | 100 99.5-100% |
| Respiratory syncytial virusᵈ | 38/40 | 95.0 83.5-98.6% | 756/757 | 99.9 99.3-100% |
ᵃ SARS-CoV-2 was detected in 1/3 FP specimens when tested with additional molecular methods.
ᵇ Human rhinovirus was detected in 1/28 FP specimens using an additional molecular method.
ᶜ Influenza A virus was detected in all three FN specimens using an additional molecular method.
ᵈ Respiratory syncytial virus was detected in the single FP specimen using an additional molecular method.
The overall success rate for initial specimen tests was 97.0% (782/806). Nine tests (9/806; 1.1%) did not complete on the initial test attempt, resulting in an instrument success rate of 98.9% (797/806) for initial specimen tests. Of the 797 tests that successfully produced a completed run on the initial test, 782 had valid internal process controls. This represents a 98.1% (782/797) success rate for internal process controls in completed runs in the initial specimen tests. While 782 specimens were successful on the initial test, successful retesting of 23 specimens and eight additional specimen exclusions unrelated to the system performance brings the total number of valid specimens analyzed to 797.
The archived specimen testing performance is summarized in Table 4.
Table 4. SPOTFIRE R/ST Panel Mini R/ST Respiratory Menu Performance Summary for All Confirmed, Valid Archived ANS Specimens
| Analyte | PPA | NPA | ||
|---|---|---|---|---|
| TP/(TP + FN) | % 95% CI | TN/(TN + FP) | % 95% CI | |
| Influenza B virus | 35/35 | 100 90.1-100% | 206/206 | 100 98.2-100% |
The prospective data combined with the archived data demonstrate acceptable performance of the SPOTFIRE R/ST Panel Mini for use with ANS specimens.
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Analytical Performance
To supplement the analytical specificity and interference testing performed for the initial release of the BIOFIRE SPOTFIRE R/ST Panel Mini, three additional off-panel organisms were tested for specificity (Table 5) and 13 additional off-panel organisms were tested for interference (Table 6).
Table 5. Summary of Results for Additionally Tested Off-Panel Organisms for Evaluation of Analytical Specificity of the SPOTFIRE R/ST Panel Mini
| Organism | Isolate ID | Concentration Tested | Observed Cross-Reactivity |
|---|---|---|---|
| Bacteria | |||
| Eikenella corrodens | ATCC BAA-1152 | 8.2E+09 cells/mL | None |
| Nocardia brasiliensis | ATCC 19019 | 1.2E+09 CFU/mL | None |
| Fungi | |||
| Pneumocystis jirovecii | ATCC PRA-159 | 2.0E+07 nuclei/mL | None |
Table 6. Additional Substances Tested on the SPOTFIRE R/ST Panel Mini - No Interference Observed
| Substance Tested | Concentration Tested |
|---|---|
| Competing Microorganisms | |
| Off-Panel | |
| Epstein-Barr virus (EBV) | 5.9E+06 copies/mL |
| Eikenella corrodens | 8.2E+08 Cells/mL |
| Lactobacillus rhamnosus | 7.9E+08 Cells/mL |
| Legionella pneumophila | 7.0E+08 Cells/mL |
| Neisseria meningitidis | 7.4E+08 Cells/mL |
| Nocardia brasiliensis | 1.2E+08 CFU/mL |
| Porphyromonas gingivalis | 5.0E+07 Cells/mL |
| Prevotella oralis | 6.2E+07 Cells/mL |
| Pseudomonas aeruginosa | 8.3E+08 Cells/mL |
| Staphylococcus epidermidis | 8.0E+08 Cells/mL |
| Streptococcus mitis | 3.2E+08 Cells/mL |
| Streptococcus mutans | 2.3E+08 Cells/mL |
| Streptococcus salivarius | 6.6E+08 Cells/mL |
Conclusion:
The fundamental scientific technology, performance, and risk of the SPOTFIRE R/ST Panel Mini remain unchanged from the predicate device. There is no change to the product itself, except for the addition of ANS as a new sample type for the Respiratory Menu, for which the performance has been shown to be substantially equivalent to the predicate device.
§ 866.3981 Device to detect and identify nucleic acid targets in respiratory specimens from microbial agents that cause the SARS-CoV-2 respiratory infection and other microbial agents when in a multi-target test.
(a)
Identification. A device to detect and identify nucleic acid targets in respiratory specimens from microbial agents that cause the SARS-CoV-2 respiratory infection and other microbial agents when in a multi-target test is an in vitro diagnostic device intended for the detection and identification of SARS-CoV-2 and other microbial agents when in a multi-target test in human clinical respiratory specimens from patients suspected of respiratory infection who are at risk for exposure or who may have been exposed to these agents. The device is intended to aid in the diagnosis of respiratory infection in conjunction with other clinical, epidemiologic, and laboratory data or other risk factors.(b)
Classification. Class II (special controls). The special controls for this device are:(1) The intended use in the labeling required under § 809.10 of this chapter must include a description of the following: Analytes and targets the device detects and identifies, the specimen types tested, the results provided to the user, the clinical indications for which the test is to be used, the specific intended population(s), the intended use locations including testing location(s) where the device is to be used (if applicable), and other conditions of use as appropriate.
(2) Any sample collection device used must be FDA-cleared, -approved, or -classified as 510(k) exempt (standalone or as part of a test system) for the collection of specimen types claimed by this device; alternatively, the sample collection device must be cleared in a premarket submission as a part of this device.
(3) The labeling required under § 809.10(b) of this chapter must include:
(i) A detailed device description, including reagents, instruments, ancillary materials, all control elements, and a detailed explanation of the methodology, including all pre-analytical methods for processing of specimens;
(ii) Detailed descriptions of the performance characteristics of the device for each specimen type claimed in the intended use based on analytical studies including the following, as applicable: Limit of Detection, inclusivity, cross-reactivity, interfering substances, competitive inhibition, carryover/cross contamination, specimen stability, precision, reproducibility, and clinical studies;
(iii) Detailed descriptions of the test procedure(s), the interpretation of test results for clinical specimens, and acceptance criteria for any quality control testing;
(iv) A warning statement that viral culture should not be attempted in cases of positive results for SARS-CoV-2 and/or any similar microbial agents unless a facility with an appropriate level of laboratory biosafety (
e.g., BSL 3 and BSL 3+, etc.) is available to receive and culture specimens; and(v) A prominent statement that device performance has not been established for specimens collected from individuals not identified in the intended use population (
e.g., when applicable, that device performance has not been established in individuals without signs or symptoms of respiratory infection).(vi) Limiting statements that indicate that:
(A) A negative test result does not preclude the possibility of infection;
(B) The test results should be interpreted in conjunction with other clinical and laboratory data available to the clinician;
(C) There is a risk of incorrect results due to the presence of nucleic acid sequence variants in the targeted pathogens;
(D) That positive and negative predictive values are highly dependent on prevalence;
(E) Accurate results are dependent on adequate specimen collection, transport, storage, and processing. Failure to observe proper procedures in any one of these steps can lead to incorrect results; and
(F) When applicable (
e.g., recommended by the Centers for Disease Control and Prevention, by current well-accepted clinical guidelines, or by published peer-reviewed literature), that the clinical performance may be affected by testing a specific clinical subpopulation or for a specific claimed specimen type.(4) Design verification and validation must include:
(i) Detailed documentation, including performance results, from a clinical study that includes prospective (sequential) samples for each claimed specimen type and, as appropriate, additional characterized clinical samples. The clinical study must be performed on a study population consistent with the intended use population and compare the device performance to results obtained using a comparator that FDA has determined is appropriate. Detailed documentation must include the clinical study protocol (including a predefined statistical analysis plan), study report, testing results, and results of all statistical analyses.
(ii) Risk analysis and documentation demonstrating how risk control measures are implemented to address device system hazards, such as Failure Modes Effects Analysis and/or Hazard Analysis. This documentation must include a detailed description of a protocol (including all procedures and methods) for the continuous monitoring, identification, and handling of genetic mutations and/or novel respiratory pathogen isolates or strains (
e.g., regular review of published literature and periodic in silico analysis of target sequences to detect possible mismatches). All results of this protocol, including any findings, must be documented and must include any additional data analysis that is requested by FDA in response to any performance concerns identified under this section or identified by FDA during routine evaluation. Additionally, if requested by FDA, these evaluations must be submitted to FDA for FDA review within 48 hours of the request. Results that are reasonably interpreted to support the conclusion that novel respiratory pathogen strains or isolates impact the stated expected performance of the device must be sent to FDA immediately.(iii) A detailed description of the identity, phylogenetic relationship, and other recognized characterization of the respiratory pathogen(s) that the device is designed to detect. In addition, detailed documentation describing how to interpret the device results and other measures that might be needed for a laboratory diagnosis of respiratory infection.
(iv) A detailed device description, including device components, ancillary reagents required but not provided, and a detailed explanation of the methodology, including molecular target(s) for each analyte, design of target detection reagents, rationale for target selection, limiting factors of the device (
e.g., saturation level of hybridization and maximum amplification and detection cycle number, etc.), internal and external controls, and computational path from collected raw data to reported result (e.g., how collected raw signals are converted into a reported signal and result), as applicable.(v) A detailed description of device software, including software applications and hardware-based devices that incorporate software. The detailed description must include documentation of verification, validation, and hazard analysis and risk assessment activities, including an assessment of the impact of threats and vulnerabilities on device functionality and end users/patients as part of cybersecurity review.
(vi) For devices intended for the detection and identification of microbial agents for which an FDA recommended reference panel is available, design verification and validation must include the performance results of an analytical study testing the FDA recommended reference panel of characterized samples. Detailed documentation must be kept of that study and its results, including the study protocol, study report for the proposed intended use, testing results, and results of all statistical analyses.
(vii) For devices with an intended use that includes detection of Influenza A and Influenza B viruses and/or detection and differentiation between the Influenza A virus subtypes in human clinical specimens, the design verification and validation must include a detailed description of the identity, phylogenetic relationship, or other recognized characterization of the Influenza A and B viruses that the device is designed to detect, a description of how the device results might be used in a diagnostic algorithm and other measures that might be needed for a laboratory identification of Influenza A or B virus and of specific Influenza A virus subtypes, and a description of the clinical and epidemiological parameters that are relevant to a patient case diagnosis of Influenza A or B and of specific Influenza A virus subtypes. An evaluation of the device compared to a currently appropriate and FDA accepted comparator method. Detailed documentation must be kept of that study and its results, including the study protocol, study report for the proposed intended use, testing results, and results of all statistical analyses.
(5) When applicable, performance results of the analytical study testing the FDA recommended reference panel described in paragraph (b)(4)(vi) of this section must be included in the device's labeling under § 809.10(b) of this chapter.
(6) For devices with an intended use that includes detection of Influenza A and Influenza B viruses and/or detection and differentiation between the Influenza A virus subtypes in human clinical specimens in addition to detection of SARS-CoV-2 and similar microbial agents, the required labeling under § 809.10(b) of this chapter must include the following:
(i) Where applicable, a limiting statement that performance characteristics for Influenza A were established when Influenza A/H3 and A/H1-2009 (or other pertinent Influenza A subtypes) were the predominant Influenza A viruses in circulation.
(ii) Where applicable, a warning statement that reads if infection with a novel Influenza A virus is suspected based on current clinical and epidemiological screening criteria recommended by public health authorities, specimens should be collected with appropriate infection control precautions for novel virulent influenza viruses and sent to State or local health departments for testing. Viral culture should not be attempted in these cases unless a BSL 3+ facility is available to receive and culture specimens.
(iii) Where the device results interpretation involves combining the outputs of several targets to get the final results, such as a device that both detects Influenza A and differentiates all known Influenza A subtypes that are currently circulating, the device's labeling must include a clear interpretation instruction for all valid and invalid output combinations, and recommendations for any required followup actions or retesting in the case of an unusual or unexpected device result.
(iv) A limiting statement that if a specimen yields a positive result for Influenza A, but produces negative test results for all specific influenza A subtypes intended to be differentiated (
i.e., H1-2009 and H3), this result requires notification of appropriate local, State, or Federal public health authorities to determine necessary measures for verification and to further determine whether the specimen represents a novel strain of Influenza A.(7) If one of the actions listed at section 564(b)(1)(A) through (D) of the Federal Food, Drug, and Cosmetic Act occurs with respect to an influenza viral strain, or if the Secretary of Health and Human Services determines, under section 319(a) of the Public Health Service Act, that a disease or disorder presents a public health emergency, or that a public health emergency otherwise exists, with respect to an influenza viral strain:
(i) Within 30 days from the date that FDA notifies manufacturers that characterized viral samples are available for test evaluation, the manufacturer must have testing performed on the device with those influenza viral samples in accordance with a standardized protocol considered and determined by FDA to be acceptable and appropriate.
(ii) Within 60 days from the date that FDA notifies manufacturers that characterized influenza viral samples are available for test evaluation and continuing until 3 years from that date, the results of the influenza emergency analytical reactivity testing, including the detailed information for the virus tested as described in the certificate of authentication, must be included as part of the device's labeling in a tabular format, either by:
(A) Placing the results directly in the device's labeling required under § 809.10(b) of this chapter that accompanies the device in a separate section of the labeling where analytical reactivity testing data can be found, but separate from the annual analytical reactivity testing results; or
(B) In a section of the device's label or in other labeling that accompanies the device, prominently providing a hyperlink to the manufacturer's public website where the analytical reactivity testing data can be found. The manufacturer's website, as well as the primary part of the manufacturer's website that discusses the device, must provide a prominently placed hyperlink to the website containing this information and must allow unrestricted viewing access.