K Number
K083088
Device Name
VERIGENE RESPIRATORY VIRUS NUCLEIC ACID TEST
Manufacturer
Date Cleared
2009-05-01

(197 days)

Product Code
Regulation Number
866.3980
AI/MLSaMDIVD (In Vitro Diagnostic)TherapeuticDiagnosticis PCCP Authorized
Intended Use
The Verigene® Respiratory Virus Nucleic Acid Test is a qualitative multiplex in vitro diagnostic test for the detection and identification of Influenza A Virus, Influenza B Virus, and Respiratory Syncytial Virus (RSV) nucleic acids purified from nasopharyngeal swab specimens obtained from patients symptomatic for viral upper respiratory infection. The test is intended to be used on the Verigene® System as an aid in the differential diagnosis of Influenza A, Influenza B, and RSV infections. The test is not intended to detect Influenza C virus. Negative results do not preclude influenza virus or RSV infection and should not be used as the sole basis for treatment or other management decisions. It is recommended that negative test results be confirmed by culture. Performance characteristics for Influenza A Virus were established when Influenza A/H3 and A/H1 were the predominant Influenza A viruses in circulation. When other Influenza A viruses are emerging, performance characteristics may vary. If infection with a novel Influenza A virus is suspected based on current clinical and epidemiological screening criteria recommended by public health authorities, specimens should be collected with appropriate infection control precautions for novel virulent Influenza viruses and sent to state or local health department for testing. Viral culture should not be attempted in these cases unless a BSL 3+ facility is available to receive and culture specimens.
Device Description
The Verigene Respiratory Virus Nucleic Acid Test (VRNAT) is based on uniquely identifying virus-specific nucleic acids for Influenza A virus, Influenza B virus, and Respiratory Syncytial Virus (RSV). The VRNAT involves the following steps: (i) Sample Preparation: Isolation of the viral RNA from nasopharyngeal swab specimens obtained from symptomatic patients. Sample preparation is conducted on an automated sample isolation system (NucliSens® easyMAG™ System, bioMérieux); (ii) Multiplex RT-PCR procedure for the generation of virus-specific amplicons: A specified volume of the eluted genomic RNA from the sample preparation step is subjected to an RT-PCR target amplification step; (iii) Verigene Test: Conducted on the Verigene® System for detection and identification of virus-specific amplicons. The Verigene System consists of two instruments, the Verigene Processor and the Verigene Reader, and utilizes single-use, disposable Test Cartridges. The Verigene Reader is a bench-top, free-standing instrument with a touch screen control panel and a wand-based barcode scanner. It utilizes a graphical user interface to guide the user through the process of ordering tests and reporting results. There are no serviceable parts and no user calibration is required. Interaction with the touch screen is minimized through barcode use. This instrument also serves as the reader of the hybridization substrate using optical detection. The key functions of the Verigene Reader include: - Entry and tracking of specimen identification numbers via manual keyboard input or via barcode-reader wand. - Test selection for each specimen. - Automated transfer of specimen processing instructions on Test Cartridge specific basis to linked Processor unit(s). - Automated imaging and analysis of Test Cartridges. - Results display. - Results report generation. The Verigene Processor performs the Verigene Test under the direction of the Verigene Reader. It has been designed to be simple and easy to use with minimal user interaction. It contains no fluids and has no user calibration requirements. There are four hybridization modules in each Verigene Processor and up to eight Verigene Processors may be connected to a single Verigene Reader. The modules within a Verigene Processor can simultaneously run different tests. When a Test Cartridge containing the sample mix is inserted, a barcode reader internal to the Verigene Processor modules reads the cartridge ID and sends it to the Verigene Reader. From this information the Verigene Reader establishes the hybridization parameters and automatically starts the Verigene Test. The Test Cartridge consists of two parts: a Reagent Pack with reservoirs preloaded with test-specific reagents, and a Substrate Holder. The reagent pack creates an air-tight hybridization chamber surrounding the region of the substrate-containing target-specific capture array. As each step in the Verigene Test is completed, old reagents are moved out of the hybridization chamber and new reagents are added from the reagent pack via microfluidics. To run the Verigene Test, the user mixes the sample with a test-specific Sample Buffer and loads this sample mix into the Test Cartridge. The Test Cartridge is subsequently inserted into the Processor. Both the identity of the test contained in the Test Cartridge and the associated patient specimen are linked with a common barcode that is unique to each Test Cartridge. Test information entered at the beginning of each test session is used to direct the associated module of the Processor unit on what steps to execute to process the Test Cartridge, and the patient specimen information is used for tracking and results reporting. Once the test is complete, the Test Cartridge is removed from the Processor unit and the reagent pack is snapped off and discarded. The remaining Test Substrate is now ready for imaging and analysis in the Reader unit. The Test Substrate is inserted into the Reader wherein it is illuminated along its side. The gold-silver aggregates at the test sites scatter the light, which is in turn captured by a photosensor. The relative intensity arising from each arrayed test site is tabulated. Net signals, defined as the absolute signal intensities with background signals subtracted, are compared with thresholds determined by negative and positive controls within the slide in order to arrive at a decision regarding the presence or absence of target. These results are linked to the test and patient information entered at the beginning of each test session to provide a comprehensive results file.
More Information

Not Found

No
The device description details a nucleic acid test using RT-PCR, hybridization, and optical detection with thresholding for analysis. There is no mention of AI or ML algorithms being used for image analysis, result interpretation, or any other part of the process. The analysis is based on comparing signal intensities to predetermined thresholds.

No.
This device is an in vitro diagnostic test designed to detect and identify viral nucleic acids as an aid in diagnosis, not to provide therapy or treatment.

Yes

The "Intended Use / Indications for Use" section explicitly states that the Verigene® Respiratory Virus Nucleic Acid Test is an "in vitro diagnostic test" and is "intended to be used on the Verigene® System as an aid in the differential diagnosis of Influenza A, Influenza B, and RSV infections."

No

The device description clearly outlines hardware components (Verigene Processor, Verigene Reader, Test Cartridges) and physical processes (sample preparation, RT-PCR, optical detection) that are integral to the device's function. While software is used for control and analysis, it is not the sole component.

Yes, this device is an IVD (In Vitro Diagnostic).

Here's why:

  • Intended Use Statement: The very first sentence explicitly states, "The Verigene® Respiratory Virus Nucleic Acid Test is a qualitative multiplex in vitro diagnostic test..." This is the most direct indicator.
  • Purpose: The test is intended to be used "as an aid in the differential diagnosis of Influenza A, Influenza B, and RSV infections." This clearly indicates its use in a clinical setting to help diagnose a medical condition.
  • Sample Type: It uses "nasopharyngeal swab specimens obtained from patients," which are biological samples taken from the human body.
  • Methodology: The test involves the detection and identification of "nucleic acids purified from nasopharyngeal swab specimens," which is a common method used in in vitro diagnostics to identify pathogens.
  • Clinical Context: The performance studies and intended use are focused on providing information for clinical decision-making regarding respiratory infections.

The entire description aligns with the definition of an in vitro diagnostic device, which is a medical device intended to be used in vitro for the examination of specimens derived from the human body solely or principally for the purpose of providing information concerning a physiological or pathological state, or a congenital abnormality, or to determine the compatibility with potential recipients, or to monitor therapeutic measures.

N/A

Intended Use / Indications for Use

The Verigene® Respiratory Virus Nucleic Acid Test is a qualitative multiplex in vitro diagnostic test for the detection and identification of Influenza A Virus, Influenza B Virus, and Respiratory Syncytial Virus (RSV) nucleic acids purified from nasopharyngeal swab specimens obtained from patients symptomatic for viral upper respiratory infection. The test is intended to be used on the Verigene® System as an aid in the differential diagnosis of Influenza A, Influenza B, and RSV infections. The test is not intended to detect Influenza C virus.

Negative results do not preclude influenza virus or RSV infection and should not be used as the sole basis for treatment or other management decisions. It is recommended that negative test results be confirmed by culture.

Performance characteristics for Influenza A Virus were established when Influenza A/H3 and A/H1 were the predominant Influenza A viruses in circulation. When other Influenza A viruses are emerging, performance characteristics may vary.

If infection with a novel Influenza A virus is suspected based on current clinical and epidemiological screening criteria recommended by public health authorities, specimens should be collected with appropriate infection control precautions for novel virulent Influenza viruses and sent to state or local health department for testing. Viral culture should not be attempted in these cases unless a BSL 3+ facility is available to receive and culture specimens.

Product codes

OCC, NSU

Device Description

The Verigene Respiratory Virus Nucleic Acid Test (VRNAT) is based on uniquely identifying virus-specific nucleic acids for Influenza A virus, Influenza B virus, and Respiratory Syncytial Virus (RSV). The VRNAT involves the following steps: (i) Sample Preparation: Isolation of the viral RNA from nasopharyngeal swab specimens obtained from symptomatic patients. Sample preparation is conducted on an automated sample isolation system (NucliSens® easyMAG™ System, bioMérieux); (ii) Multiplex RT-PCR procedure for the generation of virus-specific amplicons: A specified volume of the eluted genomic RNA from the sample preparation step is subjected to an RT-PCR target amplification step; (iii) Verigene Test: Conducted on the Verigene® System for detection and identification of virus-specific amplicons.

The Verigene System consists of two instruments, the Verigene Processor and the Verigene Reader, and utilizes single-use, disposable Test Cartridges.

The Verigene Reader is a bench-top, free-standing instrument with a touch screen control panel and a wand-based barcode scanner. It utilizes a graphical user interface to guide the user through the process of ordering tests and reporting results. There are no serviceable parts and no user calibration is required. Interaction with the touch screen is minimized through barcode use. This instrument also serves as the reader of the hybridization substrate using optical detection.

The key functions of the Verigene Reader include:

  • Entry and tracking of specimen identification numbers via manual keyboard input or via barcode-reader wand.
  • Test selection for each specimen.
  • Automated transfer of specimen processing instructions on Test Cartridgeo specific basis to linked Processor unit(s).
  • Automated imaging and analysis of Test Cartridges.
  • Results display.
  • Results report generation.

The Verigene Processor performs the Verigene Test under the direction of the Verigene Reader. It has been designed to be simple and easy to use with minimal user interaction. It contains no fluids and has no user calibration requirements. There are four hybridization modules in each Verigene Processor and up to eight Verigene Processors may be connected to a single Verigene Reader. The modules within a Verigene Processor can simultaneously run different tests. When a Test Cartridge containing the sample mix is inserted, a barcode reader internal to the Verigene Processor modules reads the cartridge ID and sends it to the Verigene Reader. From this information the Verigene Reader establishes the hybridization parameters and automatically starts the Verigene Test.

The Test Cartridge consists of two parts: a Reagent Pack with reservoirs preloaded with test-specific reagents, and a Substrate Holder. The reagent pack creates an air-tight hybridization chamber surrounding the region of the substrate-containing target-specific capture array. As each step in the Verigene Test is completed, old reagents are moved out of the hybridization chamber and new reagents are added from the reagent pack.

To run the Verigene Test, the user mixes the sample with a test-specific Sample Buffer and loads this sample mix into the Test Cartridge. The Test Cartridge is subsequently inserted into the Processor. Both the identity of the test contained in the Test Cartridge and the associated patient specimen are linked with a common barcode that is unique to each Test Cartridge. Test information entered at the beginning of each test session is used to direct the associated module of the Processor unit on what steps to execute to process the Test Cartridge, and the patient specimen information is used for tracking and results reporting. Once the test is complete, the Test Cartridge is removed from the Processor unit and the reagent pack is snapped off and discarded. The remaining Test Substrate is now ready for imaging and analysis in the Reader unit.

The Test Substrate is inserted into the Reader wherein it is illuminated along its side. The gold-silver aggregates at the test sites scatter the light, which is in turn captured by a photosensor. The relative intensity arising from each arrayed test site is tabulated. Net signals, defined as the absolute signal intensities with background signals subtracted, are compared with thresholds determined by negative and positive controls within the slide in order to arrive at a decision regarding the presence or absence of target. These results are linked to the test and patient information entered at the beginning of each test session to provide a comprehensive results file.

Mentions image processing

Automated imaging and analysis of Test Cartridges.

Mentions AI, DNN, or ML

Not Found

Input Imaging Modality

Not Found

Anatomical Site

nasopharyngeal swab specimens

Indicated Patient Age Range

0-1, 1-5, 5-20, 20-65, >65

Intended User / Care Setting

Not Found

Description of the training set, sample size, data source, and annotation protocol

Not Found

Description of the test set, sample size, data source, and annotation protocol

A total of 720 nasopharyngeal swab specimens were prospectively collected during the 2007-2008 respiratory season for routine influenza or RSV testing by DFA/culture methods. The residual specimens were frozen and later tested at three clinical sites, 240 at each site, using the Verigene® Respiratory Virus Nucleic Acid Test. The VRNAT performance was compared to a culture-based reference method followed by direct fluorescent antibody (DFA) identification of all culture positive samples. Discordant results between the VRNAT and the reference method were followed up by using bidirectional sequencing at an independent reference laboratory.

Summary of Performance Studies (study type, sample size, AUC, MRMC, standalone performance, key results)

Clinical Performance Study:
Sample Size: 720 nasopharyngeal swab specimens.
Results summary for Influenza A:
Sensitivity 99.2% (95%CI=95.5% - 99.9%)
Specificity 90.1% (95%CI=87.5% - 92.3%)

Results summary for Influenza B:
Sensitivity 96.8% (95%CI=83.5% - 99.4%)
Specificity 98.5% (95%CI=97.3% - 99.2%)

Results summary for RSV:
Sensitivity 89.8% (95%CI=78.2% - 95.6%)
Specificity 91.5% (95%CI=89.2% - 93.4%)

Reproducibility & Precision Study:
Study type: Multi-site reproducibility and precision study.
Sample size: Eight unique samples (dilutions of known viral concentrations) tested across 3 sites (Site 1: 12 non-consecutive days, 2 operators, duplicate runs; Site 2 & 3: 5 non-consecutive days, 2 operators, triplicate runs).
Key Results:
Total Reproducibility (High Negative):
Influenza A: 96.2% (95%CI=89.3%-98.7%)
Influenza B: 100% (95%CI=95.3%-100%)
RSV A: 97.4% (95%CI=91.1%-99.3%)
RSV B: 94.9% (95%CI=87.5%-98.0%)

Total Reproducibility (Low Positive):
Influenza A: 98.7% (95%CI=93.1%-99.8%)
Influenza B: 98.7% (95%CI=93.1%-99.8%)
RSV A: 98.7% (95%CI=93.1%-99.8%)
RSV B: 100% (95%CI=95.3%-100%)

Total Reproducibility (Moderate Positive):
Influenza A: 100% (95%CI=95.3%-100%)
Influenza B: 100% (95%CI=95.3%-100%)
RSV A: 100% (95%CI=95.3%-100%)
RSV B: 100% (95%CI=95.3%-100%)

Analytical Sensitivity:
Limit of Detection (LoD) determined for various viral strains (e.g., Influenza A/Wisconsin/67/05 (H3N2) at 2 TCID50/mL, Influenza B/Florida/04/2006 at 60 TCID50/mL, RSV A Strain A2 at 10 TCID50/mL, RSV B Strain B-1 Wild Type at 2 TCID50/mL). LoD defined as the lowest concentration at which ≥95% of replicates tested positive.

Analytical Reactivity (Inclusivity):
Study evaluated reactivity against 14 strains for Influenza A, 10 for Influenza B, and 5 for RSV (2 RSV A, 3 RSV B).
All viral cultures tested at 100 TCID50/mL (or EID50/mL) were detected; 100% concordance with expected results.

Analytical Specificity/Cross-Reactivity:
Tested against 15 viruses and 23 bacterial strains (38 organisms total).
No cross-reactivity observed; 'Not Detected' calls were made for all three target viruses (Influenza A, Influenza B, RSV). None of the organisms interfered with internal controls.

Competitive Inhibition:
No evidence of competitive inhibition in binary combinations of 2 viruses where one virus was ~3 logs higher than the other.

Fresh vs. Frozen Study:
Sample size: 89 paired fresh and frozen samples.
Key Results:
Influenza A: Positive % Agreement 100% (95%CI=56.6%-100%), Negative % Agreement 100% (95%CI=95.6%-100%)
Influenza B: Positive % Agreement 100% (95%CI=78.5%-100%), Negative % Agreement 100% (95%CI=91.5%-100%)
RSV: Positive % Agreement 100% (95%CI=67.6%-100%), Negative % Agreement 96.30% (95%CI=89.7%-98.7%)
3 discordant results for RSV (frozen samples positive, fresh samples negative) were analyzed by sequencing, confirming positivity in 2 out of 3 paired samples.

Interferences Study:
Over 20 potential interferents (e.g., human blood, zanamivir, oseltamivir, saline nasal spray, mucin, various nasal sprays, homeopathic remedies, common medications) were tested.
None of the potential interferents, except the Flu vaccine, affected the VRNAT performance. The Flu vaccine showed detectability limits related to its original concentration.

Key Metrics (Sensitivity, Specificity, PPV, NPV, etc.)

Influenza A Results:
Sensitivity 99.2% (95%CI=95.5% - 99.9%)
Specificity 90.1% (95%CI=87.5% - 92.3%)

Influenza B Results:
Sensitivity 96.8% (95%CI=83.5% - 99.4%)
Specificity 98.5% (95%CI=97.3% - 99.2%)

RSV Results:
Sensitivity 89.8% (95%CI=78.2% - 95.6%)
Specificity 91.5% (95%CI=89.2% - 93.4%)

Fresh vs. Frozen Comparison:
Influenza A: Positive % Agreement 100% (95%CI=56.6%-100%), Negative % Agreement 100% (95%CI=95.6%-100%)
Influenza B: Positive % Agreement 100% (95%CI=78.5%-100%), Negative % Agreement 100% (95%CI=91.5%-100%)
RSV: Positive % Agreement 100% (95%CI=67.6%-100%), Negative % Agreement 96.30% (95%CI=89.7%-98.7%)

Predicate Device(s)

K073029, K081030

Reference Device(s)

Not Found

Predetermined Change Control Plan (PCCP) - All Relevant Information

Not Found

§ 866.3980 Respiratory viral panel multiplex nucleic acid assay.

(a)
Identification. A respiratory viral panel multiplex nucleic acid assay is a qualitative in vitro diagnostic device intended to simultaneously detect and identify multiple viral nucleic acids extracted from human respiratory specimens or viral culture. The detection and identification of a specific viral nucleic acid from individuals exhibiting signs and symptoms of respiratory infection aids in the diagnosis of respiratory viral infection when used in conjunction with other clinical and laboratory findings. The device is intended for detection and identification of a combination of the following viruses:(1) Influenza A and Influenza B;
(2) Influenza A subtype H1 and Influenza A subtype H3;
(3) Respiratory Syncytial Virus subtype A and Respiratory Syncytial Virus subtype B;
(4) Parainfluenza 1, Parainfluenza 2, and Parainfluenza 3 virus;
(5) Human Metapneumovirus;
(6) Rhinovirus; and
(7) Adenovirus.
(b)
Classification. Class II (special controls). The special controls are:(1) FDA's guidance document entitled “Class II Special Controls Guidance Document: Respiratory Viral Panel Multiplex Nucleic Acid Assay;”
(2) For a device that detects and identifies Human Metapneumovirus, FDA's guidance document entitled “Class II Special Controls Guidance Document: Testing for Human Metapneumovirus (hMPV) Using Nucleic Acid Assays;” and
(3) For a device that detects and differentiates Influenza A subtype H1 and subtype H3, FDA's guidance document entitled “Class II Special Controls Guidance Document: Testing for Detection and Differentiation of Influenza A Virus Subtypes Using Multiplex Nucleic Acid Assays.” See § 866.1(e) for the availability of these guidance documents.

0

Image /page/0/Picture/0 description: The image shows the word "Nanosphere" in a bold, sans-serif font. To the left of the word is a circular logo that is partially filled with horizontal lines. The logo is black and white, and the text is black.

MAY - 1 2009

Summary of 510(k) Safety and Effectiveness

This summary of the 510(k) safety and effectiveness information is being submitted in accordance with the requirements of SMDA 1900 and CFR 807.92.

510(k) number:K083088
Summary preparation date:April 29, 2009
Submitted by:Nanosphere, Inc.
4088 Commercial Avenue
Northbrook, IL 60062
Phone: 847-400-9000
Fax: 847-400-9199
Contact:Gregory W. Shipp, M.D.
Chief Medical Officer
VP, Medical and Regulatory Affairs and Quality Assurance
Proprietary names:For instrument:
Verigene® System
For the assay:
Verigene® Respiratory Virus Nucleic Acid Test
Common names:For the instrument:
Bench-top molecular diagnostics workstation
For the assays:
Respiratory panel
Respiratory virus panel
Respiratory viruses
Influenza A assay
Influenza B assay
RSV assay
Influenza A/B and RSV assay 847-400-9199
Device descriptions:The Verigene Respiratory Virus Nucleic Acid Test (VRNAT) is based on uniquely
identifying virus-specific nucleic acids for Influenza A virus, Influenza B virus, and
Respiratory Syncytial Virus (RSV). The VRNAT involves the following steps: (i) Sample
Preparation: Isolation of the viral RNA from nasopharyngeal swab specimens obtained
from symptomatic patients. Sample preparation is conducted on an automated sample
isolation system (NucliSens® easyMAG™ System, bioMérieux); (ii) Multiplex RT-PCR
procedure for the generation of virus-specific amplicons: A specified volume of the eluted
genomic RNA from the sample preparation step is subjected to an RT-PCR target

1

amplification step; (iii) Verigene Test: Conducted on the Verigene® System for detection and identification of virus-specific amplicons.

The Verigene System consists of two instruments, the Verigene Processor and the Verigene Reader, and utilizes single-use, disposable Test Cartridges.

The Verigene Reader is a bench-top, free-standing instrument with a touch screen control panel and a wand-based barcode scanner. It utilizes a graphical user interface to guide the user through the process of ordering tests and reporting results. There are no serviceable parts and no user calibration is required. Interaction with the touch screen is minimized through barcode use. This instrument also serves as the reader of the hybridization substrate using optical detection.

The key functions of the Verigene Reader include:

  • Entry and tracking of specimen identification numbers via manual keyboard ರ input or via barcode-reader wand.
  • Test selection for each specimen. -C
  • Automated transfer of specimen processing instructions on Test Cartridgeo specific basis to linked Processor unit(s).
  • Automated imaging and analysis of Test Cartridges. O
  • Results display. O
  • Results report generation. o

The Verigene Processor performs the Verigene Test under the direction of the Verigene Reader. It has been designed to be simple and easy to use with minimal user interaction. It contains no fluids and has no user calibration requirements. There are four hybridization modules in each Verigene Processor and up to eight Verigene Processors may be connected to a single Verigene Reader. The modules within a Verigene Processor can simultaneously run different tests. When a Test Cartridge containing the sample mix is inserted, a barcode reader internal to the Verigene Processor modules reads the cartridge ID and sends it to the Verigene Reader. From this information the Verigene Reader establishes the hybridization parameters and automatically starts the Verigene Test.

The Test Cartridge consists of two parts: a Reagent Pack with reservoirs preloaded with test-specific reagents, and a Substrate Holder. The reagent pack creates an air-tight hybridization chamber surrounding the region of the substrate-containing target-specific capture array. As each step in the Verigene Test is completed, old reagents are moved oupline thay. 75 Such Rober and new reagents are added from the reagent and methods
out of the hybridization chamber and new reagents are added from the reagent pack via
mic

To run the Verigene Test, the user mixes the sample with a test-specific Sample Buffer and loads this sample mix into the Test Cartridge. The Test Cartridge is subsequently inserted into the Processor. Both the identity of the test contained in the Test Cartridge and the associated patient specimen are linked with a common barcode that is unique to each Test Cartridge. Test information entered at the beginning of each test session is used to direct the associated module of the Processor unit on what steps to execute to process the Test Cartridge, and the patient specimen information is used for tracking and results reporting. Once the test is complete, the Test Cartridge is removed from the Processor unit and the reagent pack is snapped off and discarded. The remaining Test Substrate is now ready for imaging and analysis in the Reader unit.

The Test Substrate is inserted into the Reader wherein it is illuminated along its side. The gold-silver aggregates at the test sites scatter the light, which is in turn captured by a photosensor. The relative intensity arising from each arrayed test site is tabulated. Net signals, defined as the absolute signal intensities with background signals subtracted, are compared with thresholds determined by negative and positive controls within the slide in order to arrive at a decision regarding the presence or absence of target. These results are linked to the test and patient information entered at the beginning of each test session to provide a comprehensive results file.

. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

Intended uses:

The Verigene® Respiratory Virus Nucleic Acid Test is a qualitative multiplex in vitro diagnostic test for the detection and identification of Influenza A Virus, Influenza B Virus, and Respiratory Syncytial Virus (RSV) nucleic acids purified from nasopharyngeal swab

2

specimens obtained from patients symptomatic for viral upper respiratory infection. The test is intended to be used on the Verigene® System as an aid in the differential diagnosis of Influenza A, Influenza B, and RSV infections. The test is not intended to detect Influenza C virus.

Negative results do not preclude influenza virus or RSV infection and should not be used as the sole basis for treatment or other management decisions. It is recommended that negative test results be confirmed by culture.

Performance characteristics for Influenza A Virus were established when Influenza A/H3 and A/H1 were the predominant Influenza A viruses in circulation. When other Influenza A viruses are emerging, performance characteristics may vary.

If infection with a novel Influenza A virus is suspected based on current clinical and epidemiological screening criteria recommended by public health authorities, specimens should be collected with appropriate infection control precautions for novel virulent Influenza viruses and sent to state or local health department for testing. Viral culture should not be attempted in these cases unless a BSL 3+ facility is available to receive and culture specimens.

Predicate device:

The Prodesse ProFlu+™ Assay [K073029 and K081030] is claimed as the predicate The Frouesse I Tor la Respiratory Virus Nucleic Acid Test.

The ProFlu+ Assay is a multiplex Real Time RT-PCR in vitro diagnostic test for, the rapid and qualitative detection and discrimination of Influenza A Virus, Influenza B Virus, and Respiratory Syncytial Virus (RSV) nucleic acids isolated and purified from nasopharyngeal (NP) swab specimens obtained from symptomatic patients. This test is intended for use to aid in the differential diagnosis of Influenza A, Influenza B, and RSV viral infections in humans and is not intended to detect Influenza C virus.

Negative results do not preclude influenza virus or RSV infection and should not be used as the sole basis for treatment or other management decisions. It is recommended that negative RSV results be confirmed by culture

The tables below compare the Verigene Respiratory Virus Nucleic Acid Test with the predicate device:

Similarities to predicate device

| Feature | Verigene Respiratory Virus
Nucleic Acid Test | Prodesse ProFlu+ Assay |
|--------------|-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|
| Intended use | The Verigene Respiratory Virus
Nucleic Acid Test is a qualitative in vitro diagnostic for the identification
of Influenza A virus, Influenza B virus, and Respiratory Syncytial
Virus (RSV) in nasopharyngeal swab specimens as an aid in the
differential diagnosis of patients symptomatic for viral upper
respiratory infection. The test is not intended to detect Influenza C virus.
The test is intended to be used on the Verigene System.
Negative results do not preclude influenza virus or RSV infection and
should not be used as the sole basis for treatment or other management | The ProFlu+ Assay is a multiplex
Real Time RT-PCR in vitro diagnostic test for the rapid and
qualitative detection and discrimination of Influenza A Virus,
Influenza B Virus, and Respiratory Syncytial Virus (RSV) nucleic acids
isolated and purified from nasopharyngeal (NP) swab
specimens obtained from symptomatic patients. This test is
intended for use to aid in the differential diagnosis of Influenza A,
Influenza B and RSV viral infections in humans and is not intended to
detect Influenza C.
Negative results do not preclude |

sention compilians Naclers hold Lest with the production devices,

3

| | decisions. It is recommended that
negative RSV results be confirmed
by culture. | influenza or RSV virus infection and
should not be used as the sole basis
for treatment or other management
decisions. It is recommended that
negative RSV results be confirmed
by culture. |
|----------------------|--------------------------------------------------------------------------------------------------------------------------------------------|------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|
| Targets | Influenza A
Influenza B
RSV | Influenza A
Influenza B
RSV |
| Specimen | Nasopharyngeal swabs in sample
matrix | Nasopharyngeal swabs in sample
matrix |
| Sample preparation | Automated extraction of nucleic
acids | Automated extraction of nucleic
acids |
| Sample size | 200 µL | 200 µL |
| Quality control | Internal procedural quality controls
including a process control and an
inhibition control and external quality
control solutions | Internal procedural quality control,
external quality control solutions |
| Amplification method | Multiplex RT-PCR | Multiplex RT-PCR |
| Results | M-MLV Reverse Transcriptase
Positive or negative qualitative
results | M-MLV Reverse Transcriptase
Positive or negative qualitative
results |

ക്കുന്നു. അവലംബം പ്രാപക്ഷേത്രം അതിന്റെ സ്വീകരിച്ച സംസ്ഥാനം വിവ

  1. September 2017

.

.

Differences from predicate device

:

| Feature | Verigene Respiratory Virus
Nucleic Acid Test | Prodesse ProFlu Assay |
|-----------------------|-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|------------------------------------------------------------------------------------------------------------------|
| Amplification method | Tfi polymerase | Taq polymerase |
| Contamination control | Thermolabile Uracil DNA
Glycosylase (UDG) to limit amplicon
contamination | None |
| Test principle | Gold nanoparticle probe-based
chemistry | Taqman chemistry |
| Detection method | End-point detection of the amplified
material on the Verigene System
Single-image sensor where
nanoparticles are illuminated using a
fixed-wavelength light source
Microarray format: vastly greater
multiplex capability. Allows for
greater coverage of strain variants
within the viruses. | Real-time RT-PCR
Fluorescence-based detection
Real-time detection format: limited
multiplex capability. |
| Reagent storage | Test cartridges and Sample Buffer
stored at 2 - 8 °C.
Amplification kit stored at -20 °C.
Controls stored at -20 °C. | All reagents (opened and
unopened) stored at -70 °C. |
| Quality control | Two internal procedural controls:
(i) Process Control - controls for
sample isolation and the RT-PCR
steps.
(ii) Inhibition Control - controls for
the amplification step. | Single internal procedural control. |

4

Performance Characteristics

Clinical Performance A.

A total of 720 nasopharyngeal swab specimens were prospectively collected during the 2007-2008 respiratory season for routine influenza or RSV testing by DFA/culture methods. The residual specimens were frozen and loter tested at three clinical sites, 240 at each site, using the Verigene® Respiratory Virus Nucleic Acid Test. The patient population was distributed by age as presented in the table below:

Patient Population by AgeNumber of Subjects
0 - 1120
1 - 5229
5 - 20129
20 - 65204
>6538
Total720

Samples with an initial 'No Call' result were re-tested successfully by following the recommendations in the 'Results Interpretation' section (see above). A total of 21 samples (2.9%) generated a "No Call" result; ten (10) of the samples (1.4%) gave a 'No Call – Indeterminate Zone' result indicating an equivocal call. Repeat testing resolved each of these samples. Another eleven (11) samples (1.5%) gave a 'No Call - Pos Ctr' call indicating an inability to detect an internal control. All the samples were resolved upon retest.

The VRNAT performance was compared to a culture-based reference method followed by direct fluorescent antibody (DFA) identification of all culture positive samples. The results for each target appear in the fables below. Discordant results between the VRNAT and the reference method were followed up by using bidirectional sequencing at an independent reference laboratory and described in footnotes.

Influenza A Results

| All Sites

Influenza ADFA/Viral Culture
PositiveNegativeTotal
Verigene
SystemPositive12259a181Sensitivity 99.2%
(95%CI=95.5% - 99.9%)
Negative1b538539Specificity 90.1%
(95%CI=87.5% - 92.3%)
Total123597720

58 samples were positive by sequencing. 1 sample was negative by 1 sample was negative by sequencing

Influenza B Results

b.

a.

b.

| All Sites

Influenza BDFA/Viral CultureTotal
PositiveNegative
Verigene
SystemPositive3010a40Sensitivity 96.8%
(95%CI=83.5% - 99.4%)
Negative1b679680Specificity 98.5%
(95%CI=97.3% - 99.2%)
Total31689720

4 samples were positive by sequencing. 6 samples were negative by sequencing 1 sample was negative by sequencing

5

RSV Results

| All Sites

RSVDFA/Viral Culture
PositiveNegativeTotal
Verigene
SystemPositive44a57b101Sensitivity 89.8%
(95%CI=78.2% - 95.6%)
Negative5c614619Specificity 91.5%
(95%CI=89.2% - 93.4%)
Total49671720

All 44 samples were positive by sequencing. a,

  • 46 samples were positive by sequencing. 11 samples were negative by sequencing. b.
    4 samples were positive by sequencing. 1 sample was negative by sequencing. C.

Dual Infections

Of the 720 samples included in the clinical study, 12 samples were positive for 2 infections by the VRNAT, translating to 1.7% of the samples tested. Comparable RT-PCR-based real-lime detection methods have reported a significantly lower percentage for dual infections (~0.1%). Two inter-related factors may contribute to the higher percentage of the dual infections observed in the VRNAT. Competitive inhibition is often observed in dual infections, especially when one infective agent is at a much lower initial concentration resulting thereby in amplicons below the detection limits of fluorescence-based methods. """"" The Verigene System uses gold nanoparticle probe-based technology that is at least 2-3 log orders more sensitive than fluorescence-based methods".

B. Reproducibility & Precision

The reproducibility study was performed at each of three sites. At Site 1, the reproducibility study was part of a larger precision study (see below). Eight unique samples were created by diluting known concentrations of viral particles with Viral Transport Medium. The following strains representing Influenza B, RSV A, and RSV B were used to prepare the samples: Influenza AWisconsin/67/2005; Influenza B/ Florida/04/2006; RSV A Strain Long; RSV B Strain B-1 Wild Type (B WV/14617/85). Each strain was represented at 3 distinct concentrations; high negative, low positive, and moderate positive.

Unique SamplesViral Strains and Levels
1Influenza A - High Negative; Influenza B - High Negative
2RSV A - High Negative; RSV B - High Negative
3Influenza A - Low Positive
4Influenza B - Low Positive
5RSV A - Low Positive
6RSV B - Low Positive
7Influenza A - Moderate Positive; RSV A - Moderate Positive
8Influenza B - Moderate Positive; RSV B - Moderate Positive

The precision study (Site 1) used the same set of 8 samples and was performed over 12 non-conseculive days. On each test day, two operators performed the VRNAT, involving sample isolation, target amplification, and the " Verigene Test, on set of 8 samples in duplicate (i.e., 4 sample sets per day total). In the reproducibility study performed by sites 2 and 3, the samples were analyzed on the Verigene System in triplicate daily by 2 operators on each of five non-consecutive days after undergoing sample isolation and target amplification.

in the 'Reproducibility and Precision' studies, the moderate positive samples served as positive controls since they were expected to provide positive decisions 100% of the time. The same samples also served as negative controls; 'Not Detected' decisions were expected at Influenza B and RSV B in the moderate positive samples containing Influenza A and RSV A and conversely 'Not Detected' decisions were expected at Influenza A and

ﻟﻌﺐ ﺍﻟﻤﺮﺍﺟﻊ 11 300

6

RSV A in the moderate positive samples containing Influenza B and RSV B. The positive and negative controls provided expected decisions during the studies. Calls made by the Verigene System were compared to the expected outcome as the measure of performance. The table below shows the summary results of the reproducibility study.

CharacteristicVerigene Respiratory Virus Nucleic Acid Test
Influenza AInfluenza BRSV ARSV B
Total ReproducibilityHigh Negative75/78
(96.2%)78/78
(100%)76/78
(97.4%)74/78
(94.9%)
95% CI89.3%-98.7%95.3%-100%91.1%-99.3%87.5%-98.0%
Low Positive77/78
(98.7%)77/78
(98.7%)77/78
(98.7%)78/78
(100%)
95% CI93.1%-99.8%93.1%-99.8%93.1%-99.8%95.3%-100%
Moderate Positive78/78
(100%)78/78
(100%)78/78
(100%)78/78
(100%)
95% CI95.3%-100%95.3%-100%95.3%-100%95.3%-100%

C. Analytical Sensitivity

The analytical sensitivity was demonstrated by determining the timit of detection or 'LoD of the VRNAT by using ' strains with established titers for the following viruses: Influenza B, RSV A, and RSV B. Each virus stock was serially diluted into a sample matrix (Universal Transport Media, Copan). The diution series was taken through the VRNAT process and tested in triplicate at each dilution for each virus. The limit of detection defined as the lowest concentration at which ≥95% of the replicates tested positive, was assessed based on the performance of the samples within each dilution series as judged by the Verigene calls. This LoD was confirmed by performing an additional 20 replicates for each strain in order to demonstrate that the virus was detected ≥95% of the time.

Limits of DetectionConcentration
Influenza A strains
Influenza A/Wisconsin/67/05 (H3N2)2 TCID50/mL
Influenza A/New Caledonia/20/99 (H1N1)50 TCID50/mL
Influenza A/Port Chalmers/1/73 (H3N2)50 TCID50/mL
Influenza B strains
Influenza B/Florida/04/200660 TCID50/mL
Influenza B/Lee/400.01 EID50/mL
Influenza B/Hong Kong/5/720.05 EID50/mL
RSV A strains
RSV A Strain A210 TCID50/mL
RSV A Strain Long10 TCID50/mL
RSV B strains
RSV B Strain B-1 Wild Type (B WV/14617/85)2 TCID50/mL
RSV B Strain Wash/18537/620.5 TCID50/mL
RSV B Strain 93200.05 TCID50/mL

7 of 14

7

Determination of Clinical Cut-off and VRNAT Call Algorithim D.

The Verigene Respiratory Virus Nucleic Acid Test (VRNAT) uses a microarray-based platform in which the viruses and the inhibition control (PC1) and process control (PC2) are represented by recognition elements on the Test Substrate. The recognition elements or spots are virus-specific oligonucleotide sequences that bind to the amplified viral targets, which in turn bind to gold nanoparticle probes via additional recognition elements. A gold nanoparticle probe-specific signal enhancement reaction deposits silver at the virus-specific spots. The scatter from the spots is detected by the Verigene Reader and registered as signal intensity. In addition to the above recognition elements, the Test Substrate has spots specific to positive control (PC) and negative control (NC). Three conditions were identified that together served as a single set of clinical cutoff criteria.

Condition 1: Noise Threshold

Condition 2: Normalized 'Ratio to Negative Control' (Ratio-to-NC) -- intensity at the virus-specific recognition element normalized against the intensity values at the negative control elements.

Condition 3: Normalized 'Ratio to Positive Control' (Ratio-to-PC) - intensity at the virus-specific recognition element normalized against the intensity values at the positive control elements.

The Noise Threshold was determined empirically to be equal to Negative Control + 2 SD. The Noise Threshold was determined empirically to be equal to Negative Control + 2 SD. The cut-offs for the normalized ratios, 'Ratio-to-NC' and the 'Ratio-to-PC', were determined by using ROC curves. For a positive 'Detected' decision the following criteria apply:

Condition 1: Signal intensity is above the noise threshold Condition 2: Ratio-to-NC is above 0.85

Condition 3: Ratio-to-PC is above -0.4

If any one of these criteria is not met, a negative 'Not Detected' decision is provided. If the Ratio-to-PC for any one of the three viruses falls between -0.4 and -0.5, an equivocal (i.e., No Call - IND ZONE) decision is provided. Criteria set for each of the three conditions are required to be met for a 'Detected' call.

em remariei alii sinci se gete nanoparțicie probes via additional recognitori ciclisi : .. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VRNAT Decision Process

For a result, the decision tree examines the presence of both PC1 and PC2 initially (see Schematic). Both PC1 and PC2 signal intensities have to meet the detection criteria before the analysis is allowed to proceed toward establishing the presence or absence (i.e., "Detected" or "Not Detected") of the individual viruses.

Image /page/7/Figure/11 description: The image is a flowchart outlining the VRNAT Decision Process. It starts with checking the positive control elements, specifically PC1 and PC2. If both are detected and certain ratio thresholds are met (Ratio-to-NC ≥ 0.85, Ratio-to-PC ≥ -0.4), the process proceeds to viral target identification. The flowchart then branches into three possible outcomes: Viral Agent Detected, Indeterminate Zone, or Viral Agent Not Detected, based on target signal and ratio criteria.

8

E. Analytical Reactivity

The analytical reactivity (inclusivity) of the Verigene® Respiratory Virus Nucleic Acid Test was evaluated against strains of Influenza A, Influenza B, RSV A, and RSV B that are representative of temporal and geographical diversity. Known concentrations of the different viral strains grown in culture were diluted in sample matrix (Universal Transport Media, Copan) to achieve the titers listed (see Table below). A total of 14 strains for Influenza A were tested at 100 TCID50/mL (or ElD50/mL). For Influenza B a total of 10 strains were tested at 100 TCIDML. A total of 5 RSV strains were tested at 100 TCID50/mL for RSV A (2 strains) and RSV B (3 strains). Each strain was tested in triplicate at the said concentration by the VRNAT. All viral cultures were detected; the VRNAT analytical reactivity demonstrated 100% concordance with expected results.

Analytical ReactivityConc.Influenza AInfluenza BRSV
Influenza A strains
Influenza A/Canada/578/04 (H3N2)100 TCID50/mL+--
Influenza A/New Caledonia/20/99 (H1N1)100 TCID50/mL+--
Influenza A/Hong Kong/29/2006 (H1N1)100 TCID50/mL+--
Influenza A/Wisconsin/67/05 (H3N2)100 TCID50/mL+--
Influenza A/PR/8/34 (H1N1)100 EID50/mL+--
Influenza A/Aichi/68 (H3N2)100 EID50/mL+--
Influenza A/WS/33 (H1N1)100 EID50/mL+--
Influenza A/Port Chalmers/1/73 (H3N2)100 EID50/mL+--
Influenza A/ Brisbane/59/ 2007 (H1N1)100 EID50/mL+--
Influenza A/Brisbane/10/2007 (H3N2)100 EID50/mL+--
Influenza A1/Denver/1/57 (H1N1)100 EID50/mL+--
Influenza A1/FM/1/47 (H1N1)100 EID50/mL+--
Influenza A/New Jersey/8/76 (H1N1)100 EID50/mL+--
Influenza A/NWS/33 (H1N1)100 EID50/mL+--
Influenza B strains
Influenza B/Yamanashi/166/98100 TCID50/mL-+-
Influenza B/Panama/45/90100 TCID50/mL-+-
Influenza B/Florida/02/2006100 TCID50/mL-+-
Influenza B/Florida/04/2006100 EID50/mL-+-
Influenza B/ Lee/40100 EID50/mL-+-
Influenza B/Egypt/2040/04100 TCID50/mL-+-
Influenza B/GL/1739/54100 EID50/mL-+-
Influenza B/Hong Kong/5/72100 EID50/mL-+-
Influenza B/Maryland/1/59100 EID50/mL-+-
Influenza B/Taiwan/2/62100 EID50/mL-+-
RSV A strains
RSV A Strain A2100 TCID50/mL--+
RSV A Strain Long100 TCID50/mL--+
RSV B strains
RSV B Strain B-1 Wild Type (B WV/14617/85)100 TCID50/mL--+
RSV B Strain Wash/18537/62100 TCID50/mL--+
RSV B Strain 9320100 TCID50/mL--+
VirusesStrainpfu/mLInfluenza AInfluenza BRSV
Human Adenovirus Type 1Adenoid 713.1x105---
Human Adenovirus Type 7Gomen3.1x105---
Human coronavirus (OC43)OC431.1x105---
Human coronavirus (229E)229E1.1x105---
Cytomegalovirus68-11x105---
Enterovirus, H. coxsackievirus B4J.V.B.1x105---
Epstein Barr VirusB95-86.2x108---
Human Parainfluenza Type 1C356.2x106---
Human Parainfluenza Type 2Greer2x105---
Human Parainfluenza Type 3C2431.1x107---
MeaslesEdmonston1.1x105---
Mumps virusEnders1.1x106---
Human Parainfluenza Type 4aM-251.1x105---
Human Rhinovirus Type 1A20601.1x105---
Human MetapneumovirusB-15.6x104---
Bacteriacfu/mLInfluenza AInfluenza BRSV
Acinetobacter baumannii3x105---
Bordetella bronchiseptica3x105---
Chlamydia pneumoniaeCM-11.6x106---
Corynebacterium pseudodiphtheriticum8.2x106---
Escherichia coli1.5x106---
Haemophilus influenzae1x107---
Klebsiella pneumoniae1.5x105---
Lactobacillus acidophilus2.1x107---
Legionella pneumophila2.1x106---
Listeria innocua1.2x107---
Moraxella catarrhalis1x106---
Neisseria gonorrhoeae5x106---
Neisseria meningitidis1x105---
Proteus vulgaris6x108---
Pseudomonas aeruginosa6.9x108---
Staphylococcus aureus6.1x106---
Staphylococcus epidermidis7.3x105---
Streptococcus pneumoniae9x105---
Streptococcus agalactiae2x106---
Streptococcus pyogenes2.5x106---
Streptococcus salivarius8.3x106---
Mycoplasma pneumoniae3x106---
Mycobacterium tuberculosis, attenuated*2.6x106---

் பிர்ப்பாட் : "1051".

9

F. Analytical Specificity/Cross-Reactivity

.

ー アラップスートーー・ :: .

・・ ..

· ·

:

:

10

Analytical specificity studies were performed to assess potential cross-reactivity of the VRNAT with common respiratory pathogens and other microorganisms commonly present in specimens collected from the nasopharynx. A total of 38 organisms of interest were identified as respiratory pathogens with which the majority of the population may be infected. These included 15 viruses and 23 bacterial strains which were propagated and the titers were determined. To assess cross-reactivity, each organism was diluted in a sample matrix (Universal Transport Medium, Copan) to the concentration listed in the table below and taken through all the steps of the VRNAT protocol.

None of the organisms tested interfered with the internal controls. For all the organisms tested in the VRNAT for cross-reactivity 'Not Detected' calls were made by the Verigene Reader for each of the three viruses in the VRNAT, Influenza A, Influenza B, and RSV. No cross-reactivity was observed with the common respiratory pathogens and organisms infecting the majority of the population.

G. Competitive Inhibition

Competitive inhibition in the VRNAT was assessed by using samples containing 2 viruses where one virus was ~3 logs higher than the other virus. Typically, the virus at the lower concentration was held near its limit of detection. Thus, each virus in the panel was tested against the remaining two viruses at higher concentrations and the Verigene result was used as a measure for assessing inhibition. The following strains were employed in the study: Influenza AWisconsin/67/05 (H3N2); Influenza B/ Florida/04/2006; RSV A Strain A2; RSV B Strain Wash/18537/62. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

In the binary combinations tested in these studies there was no evidence of competitive inhibition.

LowTCID50/mLHighTCID50/mL Influenza A Influenza BRSV
Influenza AInfluenza B50000++
Influenza A5RSV A50000++
Influenza A5RSV B. 20000, 20000, 200000, 2000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 6 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 - 1 -+
Influenza B10Influenza A50000++
Influenza B10RSV A50000++
Influenza B10RSV B50000 •++
RSV A25Influenza A50000++
RSV A25Influenza B50000++
RSV B10Influenza A50000as interest+.
RSV B10Influenza B'C"". 50000" lo lover oncentry1 1. 26 : 0 : 114

H. Fresh vs. Frozen

A set of 92 respiratory specimens were collected prospectively during the 2007-2008 respiratory season and tested to compare the performance of the Verigene® Respiratory Virus Nucleic Acid Test using fresh and frozen samples. An aliquot of the specimens were tested by using VRNAT while in the fresh, unfrozen state for the presence of Flu A/B and RSV. For each sample, the remaining sample volume was stored frozen at ≤ -70 ℃ for a minimum of four (4) months. The frozen samples were thawed and re-tested by using the VRNAT. The Verigene test results for the fresh samples and the corresponding frozen samples were compared to assess the VRNAT performance.

Of the 92 samples lested in the fresh and frozen state three (3) samples were excluded from the analysis as there was insufficient volume to perform tests for both fresh and frozen samples. A total of 89 paired samples were included in the results analyses, of which 27 paired samples gave positive "Detected" results for one of the three

11

viruses detected by VRNAT. Another 59 paired fresh and frozen samples gave 'Not Detected' calls for all three viruses. In all, there were three (3) discordant results as three (3) of the frozen samples that generated RSVpositive calls gave 'Not Detected' calls for the corresponding fresh samples.

| | Fresh vs. Frozen
Comparison | Influenza A | | Influenza B | | RSV | |
|--------|--------------------------------|----------------------------|--------------|----------------------------|--------------|-------------------------------|--------------|
| | | Detected | Not Detected | Detected | Not Detected | Detected | Not Detected |
| | Detected | 5 | 0 | 14 | 0 | 8 | 3 |
| | Not Detected | 0 | 84 | 0 | 75 | 0 | 78 |
| FROZEN | Positive %
Agreement | 100%
(95%CI=56.6%-100%) | | 100%
(95%CI=78.5%-100%) | | 100%
(95%CI=67.6%-100%) | |
| | Negative %
Agreement | 100%
(95%CI=95.6%-100%) | | 100%
(95%CI=91.5%-100%) | | 96.30%
(95%CI=89.7%-98.7%) | |

The discordant results (three paired samples negative for all analytes when tested fresh but positive for RSV when tested after they were stored frozen) were further analyzed. The RNA isolated from the fresh and frozen samples was subjected to bi-directional sequencing. Sequencing results confirmed that two (2) of the three tested sample pairs were RSV-positive in fresh and frozen states; repeated attempts to amplify the RNA from the fresh and frozen aliquots of the third sample failed to yield an amplicon needed for sequencing.

.. . . . . . . . . . . . . . . . . . . . . . . . . .

:

  • Carry-Over / Cross-Contamination Study l.
    Based on the collective data, there was no evidence of cross-contamination from any of the test steps including sample preparation on the NucliSens EasyMAG (bioMérieux), RT-PCR step, and the Verigene Test. Moreover, there was no evidence of any cross over within the Verigene Processor modules when high titer samples were alternated with low titer samples.

.
. . . . . . . . . . . . . . . . . . . . . . . . . .

  • Interferences J.
    The potential inhibitory effect of interfering substances or interferents that may be encountered in nasopharyngeal specimens on the Verigene Respiratory Nucleic Acid Test (VRNAT) was assessed. The viral strains and the titers used in the studies are listed in Table 1. The interferents and the amount employed in the tests are described in Table 2.
Tableable1
Viral StrainConcentration (TCID50/mL)
Influenza A/Wisconsin/67/05 (H3N2)10
Influenza B/Maryland/1/5910
RSV A Strain Long50
RSV B Strain B-1 Wild Type (B WV/14617/85)10

None of the potential interferents, except the Flu vaccine, affected the VRNAT performance making the correct 'Detected' calls for the panel viruses present in samples containing the interferents. Serial dilutions of the injectable Flu vaccine, comprising influenza virus vaccine strains of Influenza A (Flu A/Solomon Islands/3/2006; Flu A/Visconsin/67/2005) and Influenza B (Flu B/Malaysia/2506/2004) was tested in the VRNAT in the absence of Influenza A/B and RSV A/B strains. The amount of virus in the original vaccine suspension,

12

distributed equally among the three strains, was 9.0x10 ° g/mL and in the mass of mas determined that
Influenza A was not detectable below 4.5x10" g/mL and Influenza B was n

'


. . . .

Active InterferentSourceAmount
No InterferentUniversal Transport MediaNot Applicable
Human BloodHuman Blood5% v/v
ZanamivirRelenza3 mg/mL
OseltamivirTamiflu15 mg/mL
NaClSaline Nasal Spray10% v/v
MucinMucinexD4 mg/mL
PhenylephrineNeo-Synephrine10% v/v of sample
OxymetazolineSinex10% v/v of sample
BudesonidePulmicort40 µg/mL
Fluticasone propionateFlonase2.5% v/v
Homeopathic Remedies
Luffa opperculataSimilason Sinus Relief1% v/v of sample
SulfurBoiron4.5 mg/mL
Galphimia GlaucaBoiron4.5 mg/mL
Histaminum HydrochloricumBoiron4.5 mg/mL
Beclomethasone dipropionateBeclomethasone dipropionate210 µg/mL
FlunisolideFlunisolide125 µg/mL
Triamcinolone acetonideTriamcinolone acetonide27.5 µg/mL
GuaifenesinRobitussin2 mg/mL
Diphenhydramine hydrochlorineBenadryl0.5 mg/mL
Dextromethorphan hydrobromideDelsym1 mg/mL
Pseudoephedrine hydrochlorideSudafed20 µg/mL
BenzocoaineCepacol5 mg/mL
MentholHalls5 mg/mL
TobramycinTobramycin1.5 mg/mL
MupirocinMupirocin10 mg/mL
AmoxicillinAmoxicillin1 mg/mL
Flu Vaccine*AfluriaDilutions: 4.5x10 $^{-9}$ g/mL - 4.5x10 $^{-15}$ g/mL

Table 2

  • Flu Vaccine was tested in the absence of the Influenza A/B and RSV A/B strains.

น Panimalsoneralpropionater Propionater Propional Provincia

: ..

・ . .

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. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

13

" Whiley D.M., et al. Comparison of three in-house multiplex PCR assays for the detection of Neisseria gonorrhoeae and Chlamydia trachomatis using real-time and conventional detection methodologies. Pathology 2005; 37: 364-370.

" Taton, T.A., Mirkin,C.A. and Letsinger,R.L. Scanometric DNA array detection with nanoparticle probes. Science 2000, 289, 1757-1760.

اليارات در إسرا تارارال تاراس لا

i Whiley D.M., et al. Nucleic acid amplification testing for Neisseria gonorrhoeae an ongoing challenge. J Mol. Diag, 2006; 3: 3-ાં રા

" Hamilton, M.S., et al. High frequency of competitive inhibition in the Roche Cobas AMPLICOR multiplex PCR for Chlamydia trachomatis and Neisseria gonorrhoeae. J Clin. Microbiol. 2002; 40: 4394.

ii Bialasiewicz S., et al. Impact of competitive inhibition and sequence variation upon the sensitivity of Malaria PCR. J. Clin. Microbiol. 2007; 45: 1621-1623.

14

DEPARTMENT OF HEALTH & HUMAN SERVICES

Image /page/14/Picture/1 description: The image shows the logo for the U.S. Department of Health and Human Services. The logo features a stylized eagle with its wings spread, and the words "DEPARTMENT OF HEALTH & HUMAN SERVICES. USA" are arranged in a circular pattern around the eagle. The eagle is black, and the text is also black. The logo is simple and recognizable.

Public Health Service

MAY - 1 2009

Food and Drug Administration 2098 Gaither Road Rockville MD 20850

Gregory W. Shipp, MD Chief Medical Officer Vice President, Medical and Regulatory Affairs . . and Quality Assurance Nanosphere, Inc 4088 Commercial Avenue Northbrook, IL 60062

K083088 Re:

Trade/Device Name: Verigene® Respiratory Virus Nucleic Acid Test Regulation Number: 21 CFR 866.3980 ... Regulation Name: Respiratory viral panel multiplex nucleic acid assay Regulatory Class: Class II Product Code: OCC, NSU Dated: December 26, 2008 Received: April 7, 2009

Dear Dr. Shipp:

We have reviewed your Section 510(k) premarket notification of intent to market the device referenced above and have determined the device is substantially equivalent (for the indications for use stated in the enclosure) to legally marketed predicate devices marketed in interstate commerce prior to May 28, 1976, the enactment date of the Medical Device Amendments, or to devices that have been reclassified in accordance with the provisions of the Federal Food, Drug, and Cosmetic Act (Act) that do not require approval of a premarket approval application (PMA). You may, therefore, market the device, subject to the general controls provisions of the Act. The general controls provisions of the Act include requirements for annual registration, listing of devices, good manufacturing practice, labeling, and prohibitions against misbranding and adulteration.

If your device is classified (see above) into either class II (Special Controls) or class III (PMA), it may be subject to such additional controls. Existing major regulations affecting your device can be found in Title 21, Code of Federal Regulations (CFR), Parts 800 to 895. In addition, FDA may publish further announcements concerning your device in the Federal Register.

Please be advised that FDA's issuance of a substantial equivalence determination does not mean that FDA has made a determination that your device complies with other requirements of the Act or any Federal statutes and regulations administered by other Federal agencies. You must comply with all the Act's requirements, including, but not limited to: registration and listing (21 CFR Part 807); labeling (21 CFR Parts 801 and 809); and good manufacturing practice requirements as set forth in the quality systems (QS) regulation (21 CFR Part 820).

15

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This letter will allow you to begin marketing your device as described in your Section 510(k) premarket notification. The FDA finding of substantial equivalence of your device to a legally marketed predicate device results in a classification for your device and thus, permits your device to proceed to the market.

If you desire specific advice for your device on our labeling regulation (21 CFR Part 801), please contact the Office of In Vitro Diagnostic Device Evaluation and Safety at 240-276-0450. Also, please note the regulation entitled, "Misbranding by reference to premarket notification" (21CFR Part 807.97). For questions regarding postmarket surveillance, please contact CDRH's Office of Surveillance and Biometric's (OSB's) Division of Postmarket Surveillance at 240-276-3474. For questions regarding the reporting of device adverse events (Medical Device Reporting (MDR)). please contact the Division of Surveillance Systems at 240-276-3464. You may obtain other general information on your responsibilities under the Act from the Division of Small Manufacturers, International and Consumer Assistance at its toll-free number (800) 638-2041 or ' (240) 276-3150 or at its Internet address http://www.fda.gov/cdrh/industry/support/index.html.

Sincerely vours.

Sally attaym

Sally A. Hojvat, M.Sc., Ph.D. Director Division of Microbiology Devices Office of In Vitro Diagnostic Device Evaluation and Safety Center for Devices and Radiological Health

Enclosure

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Indication for Use

510(k) Number (if known): K083088

Device Name: Verigene® Respiratory Virus Nucleic Acid Test

Indication For Use:

The Verigene® Respiratory Virus Nucleic Acid Test is a qualitative multiplex in vitro diagnostic test for the detection and identification of Influenza A Virus, Influenza B Virus, and Respiratory Syncytial Virus (RSV) nucleic acids purified from nasopharyngeal swab specimens obtained from patients symptomatic for viral upper respiratory infection. The test is intended to be used on the Verigene® System as an aid in the differential diagnosis of Influenza A, Influenza B, and RSV infections. The test is not intended to detect Influenza C virus.

Negative results do not preclude influenza virus or RSV infection and should not be used as the sole basis for treatment or other management decisions. It is recommended that negative test results be confirmed by culture.

Performance characteristics for Influenza A Virus were established when Influenza A/H3 and A/H1 were the predominant Influenza A viruses in circulation. When other Influenza A viruses are emerging, performance characteristics may vary.

If infection with a novel Influenza A virus is suspected based on current clinical and evidemiological screening criteria recommended by public health authorities, specimens should be collected with appropriate infection control precautions for novel virulent Influenza viruses and sent to state or local health department for testing. Viral culture should not be attempted in these cases unless a BSL 3+ facility is available to receive and culture specimens.

Prescription Use X (21 CFR Part 801 Subpart D) And/Or

Over the Counter Use (21 CFR Part 801 Subpart C)

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Concurrence of CDRH, Office of In Vitro Diagnostic Device Evaluation and Safety (OIVD)

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Division Sign-Off Office of In Vitro Diagnostic Device Evaluation and Safety